RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 CNTN6Q9UQ52 1028 aa20.82■□□□□ 0.92
CDC42EP1-201ENST00000249014 PROSCO94903 275 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 TNFSF9P41273 254 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 MAMLD1Q13495 774 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 SLMAPQ14BN4 828 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 AZI2Q9H6S1 392 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 ADAM22Q9P0K1 906 aa20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 R3HDM2Q9Y2K5 976 aaKnown RBP20.81■□□□□ 0.92
CDC42EP1-201ENST00000249014 ADCY3O60266 1144 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 RFC5P40937 340 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 STAT5BP51692 787 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 TAS2R40P59535 323 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 PTP4A2Q12974 167 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 EPS8L3Q8TE67 593 aaKnown RBP20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 PPM1EQ8WY54 764 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 AAASQ9NRG9 546 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 PPP2R3BQ9Y5P8 575 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 GJB6O95452 261 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 CST3P01034 146 aaPredicted RBP20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 EDNRBP24530 442 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 LIG3P49916 1009 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 IFI35P80217 286 aaPredicted RBP20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 CALCOCO2Q13137 446 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 NCOA4Q13772 614 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 QPCTQ16769 361 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 ZNF568Q3ZCX4 644 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 TRIM72Q6ZMU5 477 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 MMS22LQ6ZRQ5 1243 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 CCDC25Q86WR0 208 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 DCLK3Q9C098 648 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 R3HDMLQ9H3Y0 253 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 WHRNQ9P202 907 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 ATXN2Q99700 1313 aaKnown RBP20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 LRRC37A2A6NM11 1700 aa20.8■□□□□ 0.92
CDC42EP1-201ENST00000249014 THAP12O43422 761 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 FAM189A1O60320 539 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 RALAP11233 206 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 TBXAS1P24557 533 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 IVDP26440 423 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 TCF7P36402 384 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 LIN9Q5TKA1 542 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 EEPD1Q7L9B9 569 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 SPATS2Q86XZ4 545 aaKnown RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 PHF13Q86YI8 300 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 RIOX2Q8IUF8 465 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 PRPF31Q8WWY3 499 aaKnown RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 HEMGNQ9BXL5 484 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 ADAM7Q9H2U9 754 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 NRBP2Q9NSY0 501 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 MEFVO15553 781 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 SLC20A2Q08357 652 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 KLF1Q13351 362 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 TRIP13Q15645 432 aaPredicted RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 PLEKHA7Q6IQ23 1121 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 RHBDF2Q6PJF5 856 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 ANKS1BQ7Z6G8 1248 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 FAM129AQ9BZQ8 928 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 CNOT10Q9H9A5 744 aaKnown RBP20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 ASIC3Q9UHC3 531 aa20.79■□□□□ 0.92
CDC42EP1-201ENST00000249014 RGS16O15492 202 aaPredicted RBP20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 MSCO60682 206 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 MAFO75444 373 aaPredicted RBP20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 CHKAP35790 457 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 SLCO1A2P46721 670 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 ZBTB33Q86T24 672 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 PACS2Q86VP3 889 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 CCDC50Q8IVM0 306 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 VCPIP1Q96JH7 1222 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 DDX23Q9BUQ8 820 aaKnown RBP20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 TMEM109Q9BVC6 243 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 OTOFQ9HC10 1997 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 MMP13P45452 471 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 ZNF132P52740 706 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 ADCY2Q08462 1091 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 PTK6Q13882 451 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 LY6KQ17RY6 165 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 CHADLQ6NUI6 762 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 NCAPG2Q86XI2 1143 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 BRSK2Q8IWQ3 736 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 UBR7Q8N806 425 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 MAIP1Q8WWC4 291 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 ZNF606Q8WXB4 792 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 FAM118BQ9BPY3 351 aa20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 CDC42EP4Q9H3Q1 356 aaKnown RBP20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 MRPL47Q9HD33 250 aaKnown RBP20.78■□□□□ 0.92
CDC42EP1-201ENST00000249014 TLR3O15455 904 aaKnown RBP20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 PSTPIP1O43586 416 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 C6orf118Q5T5N4 469 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 ZPBP2Q6X784 338 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 RHOT1Q8IXI2 618 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 MICALL1Q8N3F8 863 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 SPATC1LQ9H0A9 340 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 DDX20Q9UHI6 824 aaKnown RBP20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 USTQ9Y2C2 406 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 CD2APQ9Y5K6 639 aa20.77■□□□□ 0.92
CDC42EP1-201ENST00000249014 CPP00450 1065 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 ASS1P00966 412 aaKnown RBP20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 CHN1P15882 459 aa20.76■□□□□ 0.91
CDC42EP1-201ENST00000249014 ITIH2P19823 946 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms