RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 KLHL14Q9P2G3 628 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 SCN9AQ15858 1988 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 PSMC4P43686 418 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 TAS2R40P59535 323 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 ZBTB41Q5SVQ8 909 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 SLC39A4Q6P5W5 647 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 B3GNT9Q6UX72 402 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 C4orf33Q8N1A6 199 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 SGSM3Q96HU1 749 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 MCEEQ96PE7 176 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 SYNPO2Q9UMS6 1093 aa13.39□□□□□ -0.27
RAB3IP-201ENST00000247833 PLSCR1O15162 318 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 MAN1A1P33908 653 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 ARSEP51690 589 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 SMTNL2Q2TAL5 461 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 ANKMY2Q8IV38 441 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 C12orf56Q8IXR9 622 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 TMC2Q8TDI7 906 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 PAGR1Q9BTK6 254 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 TIPINQ9BVW5 301 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 DCLK3Q9C098 648 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 DEFB129Q9H1M3 183 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 CEP83Q9Y592 693 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 VWA5AO00534 786 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 ATP2A1O14983 1001 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 UBOX5O94941 541 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 TTC4O95801 387 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 WEE2P0C1S8 567 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 IRX3P78415 501 aaPredicted RBP13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 DRP2Q13474 957 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 CNGA2Q16280 664 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 FAM182AQ5T1J6 154 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 CYP4A22Q5TCH4 519 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 FAM83AQ86UY5 434 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 FAM81BQ96LP2 452 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 HERPUD2Q9BSE4 406 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 C10orf88Q9H8K7 445 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 CNOT7Q9UIV1 285 aaKnown RBP13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 ETS1P14921 441 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 CUL2Q13617 745 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 NCOA4Q13772 614 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 ENOSF1Q7L5Y1 443 aa13.38□□□□□ -0.27
RAB3IP-201ENST00000247833 EXTL3O43909 919 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 BRD2P25440 801 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 GTF2H1P32780 548 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 RPL7AP62424 266 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ORC1Q13415 861 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 HHATQ5VTY9 493 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 TDRD10Q5VZ19 366 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 C6orf89Q6UWU4 347 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 NIPA1Q7RTP0 329 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 SUGP1Q8IWZ8 645 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ZBED8Q8IZ13 594 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 SPIRE2Q8WWL2 714 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF302Q9NR11 478 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 NINJ2Q9NZG7 142 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 UMODL1Q5DID0 1318 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 PROSCO94903 275 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 CA4P22748 312 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 EMC10Q5UCC4 262 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 C7orf43Q8WVR3 580 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 PITPNM3Q9BZ71 974 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 KIAA1683Q9H0B3 1180 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 LRRC19Q9H756 370 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ECT2Q9H8V3 914 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 WHRNQ9P202 907 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 PCSK1NQ9UHG2 260 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 USP15Q9Y4E8 981 aaPredicted RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 C10orf71Q711Q0 1435 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 FSCN2O14926 492 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 DSG3P32926 999 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 HADHBP55084 474 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ARHGEF18Q6ZSZ5 1173 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 VSIG10LQ86VR7 867 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 OR5B17Q8NGF7 314 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 ZNF516Q92618 1163 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 TPX2Q9ULW0 747 aaKnown RBP13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 NAALADL1Q9UQQ1 740 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 MROH7Q68CQ1 1323 aa13.37□□□□□ -0.27
RAB3IP-201ENST00000247833 TMEM191BP0C7N4 346 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SLC1A1P43005 524 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 MAGEA4P43358 317 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 LACTBP83111 547 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 GCNT1Q02742 428 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 XKR3Q5GH77 459 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 MICALL2Q8IY33 904 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 C3orf20Q8ND61 904 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ATXN2LQ8WWM7 1075 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 CD101Q93033 1021 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 XPNPEP1Q9NQW7 623 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SAE1Q9UBE0 346 aaPredicted RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 UBR3Q6ZT12 1888 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 H0YCG3 227 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 INO80B-WBP1J3KQ70 363 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SNRPFP62306 86 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 NFX1Q12986 1120 aaKnown RBP13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 KCNT1Q5JUK3 1230 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 SPATA21Q7Z572 469 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 TXLNGYQ9BZA5 131 aa13.36□□□□□ -0.27
RAB3IP-201ENST00000247833 ROPN1BQ9BZX4 212 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms