RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MXRA8Q9BRK3 442 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 GANQ9H2C0 597 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 NPHS2Q9NP85 383 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 NDE1Q9NXR1 346 aa12.21□□□□□ -0.46
SOX9-201ENST00000245479 CORO1CQ9ULV4 474 aaPredicted RBP12.21□□□□□ -0.46
SOX9-201ENST00000245479 CASQ2O14958 399 aaPredicted RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 CDH16O75309 829 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 CNTN2Q02246 1040 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 KCNT1Q5JUK3 1230 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 ZNF662Q6ZS27 426 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 ARHGAP22Q7Z5H3 698 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 MAGEC3Q8TD91 643 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 CCT6BQ92526 530 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 TTC17Q96AE7 1141 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 UBN1Q9NPG3 1134 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 SUCLA2Q9P2R7 463 aaPredicted RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 SAE1Q9UBE0 346 aaPredicted RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 ZNF711Q9Y462 761 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 CAPN9O14815 690 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 NOL3O60936 208 aaKnown RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 ZWINTO95229 277 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 PGK2P07205 417 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 NR3C2P08235 984 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 EDRF1Q3B7T1 1238 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 WLSQ5T9L3 541 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 TRAPPC12Q8WVT3 735 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 CNKSR2Q8WXI2 1034 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 RXFP1Q9HBX9 757 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 METTL5Q9NRN9 209 aaKnown RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 CAP2P40123 477 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 ARFIP2P53365 341 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 GPC5P78333 572 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 KRT17Q04695 432 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 TKFCQ3LXA3 575 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 C4orf33Q8N1A6 199 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 TMEM237Q96Q45 408 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 STK33Q9BYT3 514 aa12.2□□□□□ -0.46
SOX9-201ENST00000245479 CNOT7Q9UIV1 285 aaKnown RBP12.2□□□□□ -0.46
SOX9-201ENST00000245479 AHCYL1O43865 530 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 SNX3O60493 162 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 PHF2O75151 1096 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 PYGMP11217 842 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 PGM1P36871 562 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 MFAP3P55082 362 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 MAPK7Q13164 816 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 CYP4A22Q5TCH4 519 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 OLFM3Q96PB7 478 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 MSTO1Q9BUK6 570 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 POLR3FQ9H1D9 316 aaPredicted RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 TXNDC16Q9P2K2 825 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 LRP6O75581 1613 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 TJP1Q07157 1748 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 PJA2O43164 708 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 MT-ND3P03897 115 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 KRT16P08779 473 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 SNHG28P0DPA3 235 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ROR2Q01974 943 aaKnown RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 OLFML2BQ68BL8 750 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 FAM43BQ6ZT52 329 aaPredicted RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 C1orf186Q6ZWK4 172 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 TRMT10CQ7L0Y3 403 aaKnown RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 C7orf31Q8N865 590 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 LENG9Q96B70 501 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 CALN1Q9BXU9 219 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 SMYD3Q9H7B4 428 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 CTNNAL1Q9UBT7 734 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 TRIM33Q9UPN9 1127 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 FAM47DPA6NHR8 397 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 MGRN1O60291 552 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 INHBAP08476 426 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 LGSNQ5TDP6 509 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 RASSF3Q86WH2 238 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ANKMY2Q8IV38 441 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 CERKQ8TCT0 537 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 SYN2Q92777 582 aaPredicted RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 OTUD5Q96G74 571 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 RPS6KC1Q96S38 1066 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ROPN1BQ9BZX4 212 aaPredicted RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 DCLRE1BQ9H816 532 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ROPN1Q9HAT0 212 aaPredicted RBP12.19□□□□□ -0.46
SOX9-201ENST00000245479 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ADAM22Q9P0K1 906 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 ADAMTSL3P82987 1691 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 BCL9LQ86UU0 1499 aa12.19□□□□□ -0.46
SOX9-201ENST00000245479 CCDC22O60826 627 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 ADRB2P07550 413 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 RRM1P23921 792 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 SERPINB3P29508 390 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 RFC1P35251 1148 aaPredicted RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 NPTX2P47972 431 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 RARRES1P49788 294 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 ZCWPW2Q504Y3 356 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 MOB2Q70IA6 237 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 FAM151AQ8WW52 585 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 SREK1Q8WXA9 508 aaKnown RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 SLC7A3Q8WY07 619 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 MYOZ2Q9NPC6 264 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 PNMA3Q9UL41 463 aa12.18□□□□□ -0.46
SOX9-201ENST00000245479 PARP4Q9UKK3 1724 aaKnown RBP12.18□□□□□ -0.46
SOX9-201ENST00000245479 MYH15Q9Y2K3 1946 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms