RNA–Protein interactions for RNA: ENST00000244745.3

SOX4-201, Transcript of SRY-box 4, humanhuman

APPRIS P1 BASIC

Gene SOX4, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4-201ENST00000244745 RABGAP1LQ5R372 815 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 C3orf20Q8ND61 904 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 RUSC1Q9BVN2 902 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 LACRTQ9GZZ8 138 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 PCMTD2Q9NV79 361 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 PRR12Q9ULL5 1215 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 RNF103-CHMP3A0A140T963 221 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 SYCE1LA8MT33 242 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 SUPT3HO75486 399 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 PRKCBP05771 671 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ATICP31939 592 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 PGBD4Q96DM1 585 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 KIF12Q96FN5 646 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.88■□□□□ 0.93
SOX4-201ENST00000244745 ADRA2BP18089 450 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 XPAP23025 273 aaPredicted RBP20.88■□□□□ 0.93
SOX4-201ENST00000244745 ZNF200P98182 395 aaPredicted RBP20.88■□□□□ 0.93
SOX4-201ENST00000244745 LRRC8EQ6NSJ5 796 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 LINC00116Q8NCU8 138 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 CATSPER1Q8NEC5 780 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ARHGEF26Q96DR7 871 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 STAP1Q9ULZ2 295 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 SNX5Q9Y5X3 404 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 NCOA4Q13772 614 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 ITIH4Q14624 930 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 TRIM65Q6PJ69 517 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 RNF149Q8NC42 400 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 NYAP2Q9P242 653 aa20.88■□□□□ 0.93
SOX4-201ENST00000244745 APRTP07741 180 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 ZC3H7BQ9UGR2 993 aaKnown RBP20.87■□□□□ 0.93
SOX4-201ENST00000244745 LRFN2Q9ULH4 789 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 DIP2BQ9P265 1576 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 KIRREL3Q8IZU9 778 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 RAB6BQ9NRW1 208 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 PMS1P54277 932 aaKnown RBP20.87■□□□□ 0.93
SOX4-201ENST00000244745 COL23A1Q86Y22 540 aaPredicted RBP20.87■□□□□ 0.93
SOX4-201ENST00000244745 TEKT4Q8WW24 435 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 BFARQ9NZS9 450 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 NAGPAQ9UK23 515 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 NAIF1Q69YI7 327 aaPredicted RBP20.87■□□□□ 0.93
SOX4-201ENST00000244745 PID1Q7Z2X4 250 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 TMEM8AQ9HCN3 771 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 LZTS1Q9Y250 596 aa20.87■□□□□ 0.93
SOX4-201ENST00000244745 NEMP1O14524 444 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 CENPCQ03188 943 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 NFX1Q12986 1120 aaKnown RBP20.86■□□□□ 0.93
SOX4-201ENST00000244745 DNAL1Q4LDG9 190 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 ITPRIPL1Q6GPH6 555 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 ZFATQ9P243 1243 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 E2F6O75461 281 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 SASH3O75995 380 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 SERPINB3P29508 390 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 VHLP40337 213 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 PIGHQ14442 188 aaPredicted RBP20.86■□□□□ 0.93
SOX4-201ENST00000244745 NTRK3Q16288 839 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 FOXR1Q6PIV2 292 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 C3orf62Q6ZUJ4 267 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 TARSP26639 723 aaKnown RBP20.86■□□□□ 0.93
SOX4-201ENST00000244745 RGS7P49802 495 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 STX3Q13277 289 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 WDR72Q3MJ13 1102 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 ADGRB2O60241 1585 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 ARHGEF37A1IGU5 675 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 RSPH10B2B2RC85 870 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 RSPH10BP0C881 870 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 RALAP11233 206 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 PRLRP16471 622 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 NBPF20Q3BBV1 942 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 ZSWIM1Q9BR11 485 aa20.86■□□□□ 0.93
SOX4-201ENST00000244745 E2F8A0AVK6 867 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 DFFAO00273 331 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 POLRMTO00411 1230 aaKnown RBP20.85■□□□□ 0.93
SOX4-201ENST00000244745 HLA-DRAP01903 254 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 CYP11B2P19099 503 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 SULT1E1P49888 294 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 CDK17Q00537 523 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 SMTNL2Q2TAL5 461 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 MTMR2Q13614 643 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 MKNK1Q9BUB5 465 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 VWDEQ8N2E2 1590 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 MED24O75448 989 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 SEC24DO94855 1032 aaPredicted RBP20.85■□□□□ 0.93
SOX4-201ENST00000244745 ANGPTL8Q6UXH0 198 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 THEM5Q8N1Q8 247 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 ACSF2Q96CM8 615 aaPredicted RBP20.85■□□□□ 0.93
SOX4-201ENST00000244745 CCDC90BQ9GZT6 254 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 SGPL1O95470 568 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 HADHAP40939 763 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 KBTBD4Q9NVX7 518 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 FAM205AQ6ZU69 1335 aa20.85■□□□□ 0.93
SOX4-201ENST00000244745 ATP6V1G2O95670 118 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 MAPK7Q13164 816 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 SLC13A5Q86YT5 568 aaPredicted RBP20.84■□□□□ 0.93
SOX4-201ENST00000244745 ARHGAP20Q9P2F6 1191 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 DGAT1O75907 488 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 TWF2Q6IBS0 349 aaKnown RBP20.84■□□□□ 0.93
SOX4-201ENST00000244745 THTPAQ9BU02 230 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 TSR3Q9UJK0 312 aaKnown RBP20.84■□□□□ 0.93
SOX4-201ENST00000244745 CAND2O75155 1236 aa20.84■□□□□ 0.93
SOX4-201ENST00000244745 EFNA5P52803 228 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms