RNA–Protein interactions for RNA: ENST00000243662.10

RAB38-201, Transcript of RAB38, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB38, Length 1,465 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38-201ENST00000243662 MAPK13O15264 365 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 SKILP12757 684 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 IGFBP6P24592 240 aaPredicted RBP16.84■□□□□ 0.29
RAB38-201ENST00000243662 ERCC5P28715 1186 aaPredicted RBP16.84■□□□□ 0.29
RAB38-201ENST00000243662 CLCNKBP51801 687 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 PSMD6Q15008 389 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 TTI2Q6NXR4 508 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 C3orf58Q8NDZ4 430 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 PLEKHO2Q8TD55 490 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 NOC3LQ8WTT2 800 aaKnown RBP16.84■□□□□ 0.29
RAB38-201ENST00000243662 LMAN2LQ9H0V9 348 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
RAB38-201ENST00000243662 XPOTO43592 962 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 AKAP3O75969 853 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 KIF4AO95239 1232 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 RPL13P26373 211 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 RPL9P32969 192 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 MCCD1P59942 119 aaPredicted RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 ADAM9Q13443 819 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 SURF1Q15526 300 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 MTERF4Q7Z6M4 381 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 DDX53Q86TM3 631 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 ENOX1Q8TC92 643 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 POF1BQ8WVV4 589 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 NELFBQ8WX92 580 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 MYLIPQ8WY64 445 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 DDX27Q96GQ7 796 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 TMEM169Q96HH4 297 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 MED15Q96RN5 788 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 DUSP9Q99956 384 aaKnown RBP16.83■□□□□ 0.28
RAB38-201ENST00000243662 COLEC11Q9BWP8 271 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 HSD3B7Q9H2F3 369 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 LMCD1Q9NZU5 365 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 ADAM28Q9UKQ2 775 aa16.83■□□□□ 0.28
RAB38-201ENST00000243662 RRP9O43818 475 aaKnown RBP16.82■□□□□ 0.28
RAB38-201ENST00000243662 GUCY2FP51841 1108 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 CLDN10P78369 228 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 CCZ1BP86790 482 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 CCZ1P86791 482 aaPredicted RBP16.82■□□□□ 0.28
RAB38-201ENST00000243662 KRT17Q04695 432 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 PAK1Q13153 545 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 KLHL10Q6JEL2 608 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 DCLRE1AQ6PJP8 1040 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 FILIP1Q7Z7B0 1213 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 BEST2Q8NFU1 509 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 CXorf38Q8TB03 319 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 PARD3BQ8TEW8 1205 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 MRPL38Q96DV4 380 aaKnown RBP16.82■□□□□ 0.28
RAB38-201ENST00000243662 BORCS6Q96GS4 357 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 TSG101Q99816 390 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 MKNK1Q9BUB5 465 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 INTS13Q9NVM9 706 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 CTNND2Q9UQB3 1225 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 PAXBP1Q9Y5B6 917 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 MTCH2Q9Y6C9 303 aa16.82■□□□□ 0.28
RAB38-201ENST00000243662 ANO9A1A5B4 782 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 KIF2AO00139 706 aaPredicted RBP16.81■□□□□ 0.28
RAB38-201ENST00000243662 PODXLO00592 558 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 UBASH3AP57075 661 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 FKBP3Q00688 224 aaKnown RBP16.81■□□□□ 0.28
RAB38-201ENST00000243662 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 FUT10Q6P4F1 479 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 WDR49Q8IV35 697 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 FAM84AQ96KN4 292 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 GAS2L1Q99501 681 aaPredicted RBP16.81■□□□□ 0.28
RAB38-201ENST00000243662 CGRRF1Q99675 332 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 GPR62Q9BZJ7 368 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 FRMD4BQ9Y2L6 1034 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 TSC2P49815 1807 aa16.81■□□□□ 0.28
RAB38-201ENST00000243662 BICDL2A1A5D9 508 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 PIRO00625 290 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 FSCN2O14926 492 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 CETN3O15182 167 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 B3GAT3O94766 335 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 SERPINC1P01008 464 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 TUBB4AP04350 444 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 ERVFC1P60507 584 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 ENPEPQ07075 957 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 TMC6Q7Z403 805 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 C1orf127Q8N9H9 656 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 CCDC112Q8NEF3 446 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 OR5B17Q8NGF7 314 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 TMC2Q8TDI7 906 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 ZNF516Q92618 1163 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 ZBP1Q9H171 429 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 TLR9Q9NR96 1032 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 STK39Q9UEW8 545 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 PUF60Q9UHX1 559 aaKnown RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 REV3LO60673 3130 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 LRRIQ3A6PVS8 624 aaPredicted RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 PPEF2O14830 753 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 IRS1P35568 1242 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 PSMC2P35998 433 aaKnown RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 AARSP49588 968 aaKnown RBP eCLIP16.8■□□□□ 0.28
RAB38-201ENST00000243662 STX17P56962 302 aa16.8■□□□□ 0.28
RAB38-201ENST00000243662 TFAMQ00059 246 aaKnown RBP16.8■□□□□ 0.28
RAB38-201ENST00000243662 PTPROQ16827 1216 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms