RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 PKD2L1Q9P0L9 805 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.46■□□□□ 0.23
DDX55-201ENST00000238146 ZHX2Q9Y6X8 837 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 CBX6O95503 412 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 KRT5P13647 590 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 SLC18A1P54219 525 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 MIER3Q7Z3K6 550 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 ANKS1BQ7Z6G8 1248 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 ENDOVQ8N8Q3 282 aaKnown RBP16.46■□□□□ 0.23
DDX55-201ENST00000238146 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 CPA5Q8WXQ8 436 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 FAM81BQ96LP2 452 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 RIT2Q99578 217 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 YIPF3Q9GZM5 350 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 SAYSD1Q9NPB0 183 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 RAB20Q9NX57 234 aa16.46■□□□□ 0.23
DDX55-201ENST00000238146 EME2A4GXA9 379 aaPredicted RBP16.45■□□□□ 0.22
DDX55-201ENST00000238146 POC1B-GALNT4F8VUJ3 575 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 UPP2O95045 317 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 RPA3P35244 121 aaPredicted RBP16.45■□□□□ 0.22
DDX55-201ENST00000238146 PTP4A2Q12974 167 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 TDRPQ86YL5 185 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 C4orf33Q8N1A6 199 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 OSBPL8Q9BZF1 889 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 ST6GALNAC4Q9H4F1 302 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.45■□□□□ 0.22
DDX55-201ENST00000238146 KLRG2A4D1S0 409 aaPredicted RBP16.45■□□□□ 0.22
DDX55-201ENST00000238146 LRRC37AA6NMS7 1700 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 PROSCO94903 275 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 P4HBP07237 508 aaKnown RBP16.45■□□□□ 0.22
DDX55-201ENST00000238146 RBM5P52756 815 aaKnown RBP eCLIP16.45■□□□□ 0.224e-6■■□□□ 12.4
DDX55-201ENST00000238146 PEX3P56589 373 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 SNRPFP62306 86 aaKnown RBP16.45■□□□□ 0.22
DDX55-201ENST00000238146 TRAF1Q13077 416 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 SLC1A5Q15758 541 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 C11orf91Q3C1V1 193 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 PCNX4Q63HM2 1172 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 LRRC8CQ8TDW0 803 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 ASAP3Q8TDY4 903 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 FOXP3Q9BZS1 431 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 GPRC5CQ9NQ84 441 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 UMODL1Q5DID0 1318 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 MYPNQ86TC9 1320 aa16.45■□□□□ 0.22
DDX55-201ENST00000238146 ENO4A6NNW6 628 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 TRAFD1O14545 582 aaPredicted RBP16.44■□□□□ 0.22
DDX55-201ENST00000238146 ITGB5P18084 799 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 KRT15P19012 456 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 ATP6V1C1P21283 382 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 ECE1P42892 770 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 TAS2R40P59535 323 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 GSTA5Q7RTV2 222 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 GLIS1Q8NBF1 620 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 TTC8Q8TAM2 541 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 MXRA8Q9BRK3 442 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 DENND2DQ9H6A0 471 aaPredicted RBP16.44■□□□□ 0.22
DDX55-201ENST00000238146 EHMT1Q9H9B1 1298 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 SPATS2LQ9NUQ6 558 aaKnown RBP16.44■□□□□ 0.22
DDX55-201ENST00000238146 SMG5Q9UPR3 1016 aaKnown RBP16.44■□□□□ 0.22
DDX55-201ENST00000238146 ZNF536O15090 1300 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 DPPA5A6NC42 116 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 H0Y3Z8 333 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 ENTPD5O75356 428 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 FGFR1P11362 822 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 ATP4AP20648 1035 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 RASSF2P50749 326 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 FASTKD3Q14CZ7 662 aaKnown RBP16.44■□□□□ 0.22
DDX55-201ENST00000238146 WASHC2DQ5SRD0 308 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 LARGE2Q8N3Y3 721 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 SUPT20HQ8NEM7 779 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 SMC6Q96SB8 1091 aa16.44■□□□□ 0.22
DDX55-201ENST00000238146 TMEM150BA6NC51 233 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 G3V3G9 751 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 CA4P22748 312 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 PCK1P35558 622 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 PTDSS1P48651 473 aaKnown RBP16.43■□□□□ 0.22
DDX55-201ENST00000238146 CMPK2Q5EBM0 449 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 HP1BP3Q5SSJ5 553 aaPredicted RBP16.43■□□□□ 0.22
DDX55-201ENST00000238146 DCAF8Q5TAQ9 597 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 SV2AQ7L0J3 742 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.43■□□□□ 0.22
DDX55-201ENST00000238146 PI4K2AQ9BTU6 479 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 FHDC1Q9C0D6 1143 aaPredicted RBP16.43■□□□□ 0.22
DDX55-201ENST00000238146 CYLDQ9NQC7 956 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 MYBL1P10243 752 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 CALRP27797 417 aaKnown RBP16.43■□□□□ 0.22
DDX55-201ENST00000238146 NCKAP1LP55160 1127 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 LMNB2Q03252 620 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 TAF1BQ53T94 588 aaPredicted RBP16.43■□□□□ 0.22
DDX55-201ENST00000238146 CEP128Q6ZU80 1094 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 OTOAQ7RTW8 1153 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 RHOT1Q8IXI2 618 aa16.43■□□□□ 0.22
DDX55-201ENST00000238146 PSTPIP1O43586 416 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 TYROBPO43914 113 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CD58P19256 250 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CNGA1P29973 690 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 CCDC125Q86Z20 511 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 KATNAL2Q8IYT4 538 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 OGFOD1Q8N543 542 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 IWS1Q96ST2 819 aa16.42■□□□□ 0.22
DDX55-201ENST00000238146 TLE6Q9H808 572 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms