RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 TMC2Q8TDI7 906 aa9.74□□□□□ -0.85
SYDE2-201ENST00000234668 ATXN2LQ8WWM7 1075 aaKnown RBP9.74□□□□□ -0.85
SYDE2-201ENST00000234668 ARHGEF2Q92974 986 aaKnown RBP9.74□□□□□ -0.85
SYDE2-201ENST00000234668 DDX27Q96GQ7 796 aaKnown RBP9.74□□□□□ -0.85
SYDE2-201ENST00000234668 TJP2Q9UDY2 1190 aa9.74□□□□□ -0.85
SYDE2-201ENST00000234668 ANAPC5Q9UJX4 755 aa9.74□□□□□ -0.85
SYDE2-201ENST00000234668 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.74□□□□□ -0.85
SYDE2-201ENST00000234668 F8VP50 259 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 BANF1O75531 89 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 BRD2P25440 801 aaKnown RBP9.73□□□□□ -0.85
SYDE2-201ENST00000234668 DYNLT1P63172 113 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 PPP2R5EQ16537 467 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 ZACNQ401N2 412 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 DPH6Q7L8W6 267 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
SYDE2-201ENST00000234668 FAM129AQ9BZQ8 928 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 DCLK3Q9C098 648 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 PDLIM7Q9NR12 457 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 ARHGAP28Q9P2N2 729 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 PCDHB2Q9Y5E7 798 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 PIK3R2O00459 728 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 EXTL3O43909 919 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 MTA2O94776 668 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 IFNB1P01574 187 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 IVDP26440 423 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 MMP13P45452 471 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 GTF2A1P52655 376 aaPredicted RBP9.73□□□□□ -0.85
SYDE2-201ENST00000234668 MAMLD1Q13495 774 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 CUL2Q13617 745 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 TNFAIP1Q13829 316 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 C6orf118Q5T5N4 469 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 POTEAQ6S8J7 498 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 TRPM4Q8TD43 1214 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 TRAPPC12Q8WVT3 735 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF317Q96PQ6 595 aaPredicted RBP9.73□□□□□ -0.85
SYDE2-201ENST00000234668 LRRC19Q9H756 370 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF302Q9NR11 478 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 FGFR1OP2Q9NVK5 253 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 COL2A1P02458 1487 aaPredicted RBP9.73□□□□□ -0.85
SYDE2-201ENST00000234668 ATP8B3O60423 1300 aa9.73□□□□□ -0.85
SYDE2-201ENST00000234668 TMEM120BA0PK00 339 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 TCP11X1B4DZS4 312 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SPAG7O75391 227 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ECM2O94769 699 aaPredicted RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 HSPA6P17066 643 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ACO1P21399 889 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 GTF2H1P32780 548 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 NRLP54845 237 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 NOP14P78316 857 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 PLCB3Q01970 1234 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 CYP1B1Q16678 543 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 LY6KQ17RY6 165 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SMTNL2Q2TAL5 461 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 DALRD3Q5D0E6 543 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 KCNT1Q5JUK3 1230 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ICE2Q659A1 982 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SRRM1Q8IYB3 904 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 THNSL1Q8IYQ7 743 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 CEP120Q8N960 986 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MCPH1Q8NEM0 835 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 REPS2Q8NFH8 660 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 GPRASP2Q96D09 838 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 HVCN1Q96D96 273 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 PAGR1Q9BTK6 254 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 OSBPL8Q9BZF1 889 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MTMR12Q9C0I1 747 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SLC40A1Q9NP59 571 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF646O15015 1829 aaPredicted RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MAPK13O15264 365 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 CPP00450 1065 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SUPT20HL2P0C7V6 817 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 FDX1P10109 184 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ATF2P15336 505 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MYL6P60660 151 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 NCOA4Q13772 614 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 FASTKD3Q14CZ7 662 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SUPT20HL1Q3ZLR7 823 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ANKRD20A8PQ5CZ79 823 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 XKR3Q5GH77 459 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ZNF365Q70YC5 407 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SCYL3Q8IZE3 742 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 PGM2Q96G03 612 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 ABCF3Q9NUQ8 709 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 NXF1Q9UBU9 619 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 DNPEPQ9ULA0 475 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 IVNS1ABPQ9Y6Y0 642 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 POC1B-GALNT4F8VUJ3 575 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 PGK2P07205 417 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 RAP1GAPP47736 663 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 SCTRP47872 440 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 NOMO3P69849 1222 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 TFAMQ00059 246 aaKnown RBP9.72□□□□□ -0.85
SYDE2-201ENST00000234668 GCNT1Q02742 428 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 GAD2Q05329 585 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 CNGA2Q16280 664 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 TREML2Q5T2D2 321 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MIS18BP1Q6P0N0 1132 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MFSD7Q6UXD7 560 aa9.72□□□□□ -0.85
SYDE2-201ENST00000234668 MON1BQ7L1V2 547 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms