RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 CDH16O75309 829 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 TSPY3P0CV98 308 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 TSPY8P0CW00 308 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 SOX5P35711 763 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 TNNI2P48788 182 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 FOXR2Q6PJQ5 311 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 RNF207Q6ZRF8 634 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 SAMD7Q7Z3H4 446 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ARHGAP18Q8N392 663 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 PDCD7Q8N8D1 485 aaKnown RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 ATG4AQ8WYN0 398 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 PIGSQ96S52 555 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ARL8BQ9NVJ2 186 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 TRAFD1O14545 582 aaPredicted RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 GSC2O15499 205 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 PLA2G4BP0C869 781 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 NT5C2P49902 561 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ZNF746Q6NUN9 644 aaPredicted RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 CAPN12Q6ZSI9 719 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 FRMD5Q7Z6J6 570 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 DGKHQ86XP1 1220 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ZNF444Q8N0Y2 327 aaPredicted RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 NMD3Q96D46 503 aaKnown RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 CYTH2Q99418 400 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 CENPKQ9BS16 269 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 BTBD10Q9BSF8 475 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ASCC2Q9H1I8 757 aaPredicted RBP16.73■□□□□ 0.27
DDX1-201ENST00000233084 IKZF4Q9H2S9 585 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 SYNCQ9H7C4 482 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 ZNF287Q9HBT7 754 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 TMOD2Q9NZR1 351 aa16.73■□□□□ 0.27
DDX1-201ENST00000233084 POTEB3A0JP26 581 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 POTECB2RU33 542 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 TULP1O00294 542 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 CCDC22O60826 627 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 HSPA6P17066 643 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 SHMT1P34896 483 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 LSAMPQ13449 338 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 PLEKHG4Q58EX7 1191 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 HP1BP3Q5SSJ5 553 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 POTEBQ6S5H4 581 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 OTOAQ7RTW8 1153 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 SLC13A5Q86YT5 568 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 RIBC1Q8N443 379 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 DNAJC1Q96KC8 554 aaKnown RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 DNAJC12Q9UKB3 198 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 TMCO1Q9UM00 188 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 A0A0G2JND7 137 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 POC1B-GALNT4F8VUJ3 575 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 CLDN3O15551 220 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 OPHN1O60890 802 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 AMPD1P23109 780 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 RPA3P35244 121 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 SPARCL1Q14515 664 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 CLUL1Q15846 466 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 EDRF1Q3B7T1 1238 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 TBC1D10BQ4KMP7 808 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 COA7Q96BR5 231 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 PRR11Q96HE9 360 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 TMEM47Q9BQJ4 181 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 SPZ1Q9BXG8 430 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 SUDS3Q9H7L9 328 aaPredicted RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 TLE6Q9H808 572 aa16.72■□□□□ 0.27
DDX1-201ENST00000233084 METTL14Q9HCE5 456 aaKnown RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 STX18Q9P2W9 335 aaKnown RBP16.72■□□□□ 0.27
DDX1-201ENST00000233084 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.71■□□□□ 0.27
DDX1-201ENST00000233084 FGFR1P11362 822 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 ANXA13P27216 316 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 FKBP1CQ5VVH2 108 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 TRIM42Q8IWZ5 723 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 BCAS3Q9H6U6 928 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 PI4KBQ9UBF8 816 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 ANKRD62A6NC57 917 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 PALM3A6NDB9 673 aaPredicted RBP16.71■□□□□ 0.27
DDX1-201ENST00000233084 SPOPO43791 374 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 BAG2O95816 211 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 DESP17661 470 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 KRT15P19012 456 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 CA4P22748 312 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 CPA2P48052 419 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 GPR162Q16538 588 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 CTC1Q2NKJ3 1217 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 RINLQ6ZS11 566 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 SLC20A1Q8WUM9 679 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 FAM151AQ8WW52 585 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 ABTB1Q969K4 478 aaPredicted RBP16.71■□□□□ 0.27
DDX1-201ENST00000233084 GPRC5DQ9NZD1 345 aa16.71■□□□□ 0.27
DDX1-201ENST00000233084 LARSQ9P2J5 1176 aaKnown RBP16.71■□□□□ 0.27
DDX1-201ENST00000233084 ASTN2O75129 1339 aaPredicted RBP16.71■□□□□ 0.27
DDX1-201ENST00000233084 EDIL3O43854 480 aa16.7■□□□□ 0.26
DDX1-201ENST00000233084 PENKP01210 267 aaPredicted RBP16.7■□□□□ 0.26
DDX1-201ENST00000233084 ADCY8P40145 1251 aa16.7■□□□□ 0.26
DDX1-201ENST00000233084 SLC1A5Q15758 541 aa16.7■□□□□ 0.26
DDX1-201ENST00000233084 LARP7Q4G0J3 582 aaKnown RBP eCLIP16.7■□□□□ 0.26
DDX1-201ENST00000233084 SPATA24Q86W54 205 aa16.7■□□□□ 0.26
DDX1-201ENST00000233084 CDAN1Q8IWY9 1227 aa16.7■□□□□ 0.26
DDX1-201ENST00000233084 RFWD2Q8NHY2 731 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms