RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 LMBR1Q8WVP7 490 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ZBTB45Q96K62 511 aaPredicted RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 GCOM2Q9BZD3 368 aaPredicted RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 ZCCHC2Q9C0B9 1178 aaKnown RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 TTYH3Q9C0H2 523 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 INTS2Q9H0H0 1204 aaKnown RBP10.54□□□□□ -0.72
TTC1-201ENST00000231238 PLCB1Q9NQ66 1216 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SPTLC3Q9NUV7 552 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 ZNF232Q9UNY5 417 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 DOCK3Q8IZD9 2030 aa10.54□□□□□ -0.72
TTC1-201ENST00000231238 SERTM1A2A2V5 107 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 M0QZ92 97 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 RNF225M0QZC1 329 aaPredicted RBP10.53□□□□□ -0.72
TTC1-201ENST00000231238 KIF2AO00139 706 aaPredicted RBP10.53□□□□□ -0.72
TTC1-201ENST00000231238 AKR1B10O60218 316 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 CCDC172P0C7W6 258 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 GJA9P57773 515 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 PSMA6P60900 246 aaKnown RBP10.53□□□□□ -0.72
TTC1-201ENST00000231238 DLG4P78352 724 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 KRT83P78385 493 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 MAP2K1Q02750 393 aaPredicted RBP10.53□□□□□ -0.72
TTC1-201ENST00000231238 POU5F1BQ06416 359 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 CBWD6Q4V339 395 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 ARHGAP29Q52LW3 1261 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 CBWD3Q5JTY5 395 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 CBWD5Q5RIA9 395 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 KLHDC7AQ5VTJ3 777 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 KRT39Q6A163 491 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 MPZL3Q6UWV2 235 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 TOGARAM2Q6ZUX3 1019 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 KIAA1328Q86T90 577 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 TMEM139Q8IV31 216 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 TRPV1Q8NER1 839 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 PPP1R13LQ8WUF5 828 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 ABHD17AQ96GS6 310 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 ACO2Q99798 780 aaKnown RBP10.53□□□□□ -0.72
TTC1-201ENST00000231238 ADPGKQ9BRR6 497 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 DESI2Q9BSY9 194 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 TMEM8AQ9HCN3 771 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 PPP2R2CQ9Y2T4 447 aa10.53□□□□□ -0.72
TTC1-201ENST00000231238 A0A0B4J269 797 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 SMIM35A0A1B0GVV1 85 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 LRRIQ3A6PVS8 624 aaPredicted RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 EPHB6O15197 1021 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 OGTO15294 1046 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 MSCO60682 206 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 TNNT1P13805 278 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 UCHL3P15374 230 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 GTF2H1P32780 548 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 STAT1P42224 750 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 PURAQ00577 322 aaKnown RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 MBTD1Q05BQ5 628 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 KLHL30Q0D2K2 578 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 TMEM62Q0P6H9 643 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 MTF1Q14872 753 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 PSMD6Q15008 389 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 SURF1Q15526 300 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 KIZQ2M2Z5 673 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 E4F1Q66K89 784 aaPredicted RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 TRIM65Q6PJ69 517 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 CXCL17Q6UXB2 119 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 CATSPER4Q7RTX7 472 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 SRGAP1Q7Z6B7 1085 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 RNF180Q86T96 592 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 RSPH3Q86UC2 560 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 VPS36Q86VN1 386 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 NLRP8Q86W28 1048 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 THNSL1Q8IYQ7 743 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 CCDC170Q8IYT3 715 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 TXLNBQ8N3L3 684 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 ZSWIM2Q8NEG5 633 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 PARD3BQ8TEW8 1205 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 KAT2BQ92831 832 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 KCNN1Q92952 543 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 PPP1R13BQ96KQ4 1090 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 MFSD14AQ96MC6 490 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 CHP1Q99653 195 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.52□□□□□ -0.73
TTC1-201ENST00000231238 NFKBIZQ9BYH8 718 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 CCDC113Q9H0I3 377 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 NHEJ1Q9H9Q4 299 aaPredicted RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 LUC7LQ9NQ29 371 aaKnown RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 R3HCC1Q9Y3T6 440 aaKnown RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 DAAM1Q9Y4D1 1078 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 FHOD1Q9Y613 1164 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 EPN1Q9Y6I3 576 aaPredicted RBP10.52□□□□□ -0.73
TTC1-201ENST00000231238 STYXL1Q9Y6J8 313 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 MGAMO43451 1857 aa10.52□□□□□ -0.73
TTC1-201ENST00000231238 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.51□□□□□ -0.73
TTC1-201ENST00000231238 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
TTC1-201ENST00000231238 NDUFA10O95299 355 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 SERPING1P05155 500 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 MX2P20592 715 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 CCND3P30281 292 aaPredicted RBP10.51□□□□□ -0.73
TTC1-201ENST00000231238 USP8P40818 1118 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 PIK3CAP42336 1068 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 GPC3P51654 580 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 OSTNP61366 133 aa10.51□□□□□ -0.73
TTC1-201ENST00000231238 APBA1Q02410 837 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms