RNA–Protein interactions for RNA: ENST00000231061.8

SPARC-201, Transcript of secreted protein acidic and cysteine rich, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPARC, Length 3,701 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-201ENST00000231061 SMAD1Q15797 465 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 ZNF124Q15973 351 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 ZNF365Q70YC5 407 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 VASH1Q7L8A9 365 aaPredicted RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 LZICQ8WZA0 190 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 RUBCNQ92622 972 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 KIFAP3Q92845 792 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 GPKOWQ92917 476 aaPredicted RBP eCLIP8.84□□□□□ -0.99
SPARC-201ENST00000231061 BRIP1Q9BX63 1249 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 RRN3Q9NYV6 651 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 GNEQ9Y223 722 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 PCDHGA8Q9Y5G5 932 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 XDHP47989 1333 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 SLIT2O94813 1529 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 H3BQF6 201 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 ZBTB14O43829 449 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 TLR2O60603 784 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 PENKP01210 267 aaPredicted RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 GYPCP04921 128 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 COPB1P53618 953 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 ATP2C1P98194 919 aaPredicted RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 KIF5AQ12840 1032 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 MOGQ16653 247 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 INSCQ1MX18 579 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 CLVS2Q5SYC1 327 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 CDKAL1Q5VV42 579 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 SIGIRRQ6IA17 410 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 PDE12Q6L8Q7 609 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 LIN54Q6MZP7 749 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 HHIPL2Q6UWX4 724 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 SH3RF1Q7Z6J0 888 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 CCDC24Q8N4L8 307 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 APOL5Q9BWW9 433 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 GDAQ9Y2T3 454 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 TIAM2Q8IVF5 1701 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 NUP98P52948 1817 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 KCNJ18B7U540 433 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 TBC1D8O95759 1140 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 PPP2R2AP63151 447 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 UBXN1Q04323 297 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 CCINQ13939 588 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 KCNJ12Q14500 433 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 ZNF704Q6ZNC4 412 aaPredicted RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 APTXQ7Z2E3 356 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 SCUBE1Q8IWY4 988 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 RTKN2Q8IZC4 609 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 LSMEM1Q8N8F7 131 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 RMDN1Q96DB5 314 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 LRGUKQ96M69 825 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 CGREF1Q99674 301 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 VPS11Q9H270 941 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 KAT14Q9H8E8 782 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 ZNF148Q9UQR1 794 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 ERVK-19Q9WJR5 959 aa8.84□□□□□ -0.99
SPARC-201ENST00000231061 BAZ2BQ9UIF8 2168 aaKnown RBP8.84□□□□□ -0.99
SPARC-201ENST00000231061 C17orf113A0A1B0GUU1 675 aa8.83□□□□□ -1
SPARC-201ENST00000231061 GOLGA8SH3BPF8 625 aa8.83□□□□□ -1
SPARC-201ENST00000231061 TP73O15350 636 aa8.83□□□□□ -1
SPARC-201ENST00000231061 VEGFAP15692 232 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 KLRK1P26718 216 aa8.83□□□□□ -1
SPARC-201ENST00000231061 KRT9P35527 623 aa8.83□□□□□ -1
SPARC-201ENST00000231061 TMED10P49755 219 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 SPAG1Q07617 926 aa8.83□□□□□ -1
SPARC-201ENST00000231061 Q3ZCU0 254 aa8.83□□□□□ -1
SPARC-201ENST00000231061 XKR5Q6UX68 686 aa8.83□□□□□ -1
SPARC-201ENST00000231061 FBXO33Q7Z6M2 555 aa8.83□□□□□ -1
SPARC-201ENST00000231061 OR6P1Q8NGX9 317 aa8.83□□□□□ -1
SPARC-201ENST00000231061 AFAP1L1Q8TED9 768 aa8.83□□□□□ -1
SPARC-201ENST00000231061 HDAC2Q92769 488 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 SDCCAG3Q96C92 435 aa8.83□□□□□ -1
SPARC-201ENST00000231061 ZPBPQ9BS86 351 aa8.83□□□□□ -1
SPARC-201ENST00000231061 CHD4Q14839 1912 aa8.83□□□□□ -1
SPARC-201ENST00000231061 TYW5A2RUC4 315 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 NUTM2BA6NNL0 878 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 NUTM2EB1AL46 878 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 TFRCP02786 760 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 FYNP06241 537 aa8.83□□□□□ -1
SPARC-201ENST00000231061 KCNQ4P56696 695 aa8.83□□□□□ -1
SPARC-201ENST00000231061 PDE1BQ01064 536 aa8.83□□□□□ -1
SPARC-201ENST00000231061 LONRF2Q1L5Z9 754 aa8.83□□□□□ -1
SPARC-201ENST00000231061 SMIM5Q71RC9 77 aa8.83□□□□□ -1
SPARC-201ENST00000231061 CCNYL1Q8N7R7 359 aa8.83□□□□□ -1
SPARC-201ENST00000231061 CELF1Q92879 486 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 FAM84BQ96KN1 310 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 SELENOSQ9BQE4 189 aa8.83□□□□□ -1
SPARC-201ENST00000231061 OSBPL1AQ9BXW6 950 aa8.83□□□□□ -1
SPARC-201ENST00000231061 TUFT1Q9NNX1 390 aa8.83□□□□□ -1
SPARC-201ENST00000231061 RMND1Q9NWS8 449 aa8.83□□□□□ -1
SPARC-201ENST00000231061 CDC23Q9UJX2 597 aa8.83□□□□□ -1
SPARC-201ENST00000231061 AGO2Q9UKV8 859 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 MINPP1Q9UNW1 487 aa8.83□□□□□ -1
SPARC-201ENST00000231061 RTCBQ9Y3I0 505 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 RWDD3Q9Y3V2 267 aa8.83□□□□□ -1
SPARC-201ENST00000231061 LRP5O75197 1615 aa8.83□□□□□ -1
SPARC-201ENST00000231061 DNAJC8O75937 253 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 OR1G1P47890 313 aa8.83□□□□□ -1
SPARC-201ENST00000231061 PDE1CQ14123 709 aaPredicted RBP8.83□□□□□ -1
SPARC-201ENST00000231061 VEPH1Q14D04 833 aa8.83□□□□□ -1
SPARC-201ENST00000231061 PRPF38BQ5VTL8 546 aaKnown RBP8.83□□□□□ -1
SPARC-201ENST00000231061 FAM83AQ86UY5 434 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms