RNA–Protein interactions for RNA: ENST00000228918.8

LTBR-201, Transcript of lymphotoxin beta receptor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LTBR, Length 2,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-201ENST00000228918 MGARPQ8TDB4 240 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 DYDC1Q8WWB3 177 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 ATG4CQ96DT6 458 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 IFT74Q96LB3 600 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 SIP14410 1827 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 MYH9P35579 1960 aaKnown RBP17.31■□□□□ 0.36
LTBR-201ENST00000228918 H0YCG3 227 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 PSAPP07602 524 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 ADCY8P40145 1251 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 PIK3CAP42336 1068 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 VPS41P49754 854 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 LIG4P49917 911 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 TAS2R40P59535 323 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 PRKCEQ02156 737 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 SPOPLQ6IQ16 392 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 RHOT1Q8IXI2 618 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 NIM1KQ8IY84 436 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 SCLT1Q96NL6 688 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 C11orf70Q9BRQ4 267 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 HEMGNQ9BXL5 484 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 MYOZ2Q9NPC6 264 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 CYP26B1Q9NR63 512 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 GINM1Q9NU53 330 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 TPX2Q9ULW0 747 aaKnown RBP17.31■□□□□ 0.36
LTBR-201ENST00000228918 PTPRJQ12913 1337 aa17.31■□□□□ 0.36
LTBR-201ENST00000228918 RGS20O76081 388 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 CFHP08603 1231 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 FDX1P10109 184 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 TNNI1P19237 187 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 DSG3P32926 999 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 NLRP11P59045 1033 aaKnown RBP17.3■□□□□ 0.36
LTBR-201ENST00000228918 NOMO3P69849 1222 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 CCNG2Q16589 344 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 LIN9Q5TKA1 542 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 TRIM72Q6ZMU5 477 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 FAM228AQ86W67 206 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 KATNAL2Q8IYT4 538 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.3■□□□□ 0.36
LTBR-201ENST00000228918 PWWP2AQ96N64 755 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 LGALS13Q9UHV8 139 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 RLFQ13129 1914 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 TCP11X1B4DZS4 312 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 MGRN1O60291 552 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 VNN1O95497 513 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 ABCD1P33897 745 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 OSBPL8Q9BZF1 889 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 JPH1Q9HDC5 661 aaPredicted RBP17.3■□□□□ 0.36
LTBR-201ENST00000228918 ABCF3Q9NUQ8 709 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 FGFR1OP2Q9NVK5 253 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 CD2APQ9Y5K6 639 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 STYXL1Q9Y6J8 313 aa17.3■□□□□ 0.36
LTBR-201ENST00000228918 NFASCO94856 1347 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 CXCL9Q07325 125 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 MAMLD1Q13495 774 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 CUL2Q13617 745 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 ZNF365Q70YC5 407 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 PASD1Q8IV76 773 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 CCDC89Q8N998 374 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 BBOF1Q8ND07 529 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 FAM118BQ9BPY3 351 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
LTBR-201ENST00000228918 MRPL47Q9HD33 250 aaKnown RBP17.29■□□□□ 0.36
LTBR-201ENST00000228918 ADAM22Q9P0K1 906 aa17.29■□□□□ 0.36
LTBR-201ENST00000228918 FOXO6A8MYZ6 492 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 ELF3P78545 371 aaPredicted RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 SP4Q02446 784 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 PLEKHA7Q6IQ23 1121 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 ANKS1BQ7Z6G8 1248 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 PHF13Q86YI8 300 aaPredicted RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 RELL1Q8IUW5 271 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 ABRAQ8N0Z2 381 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 EXD1Q8NHP7 514 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 CKAP2Q8WWK9 683 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 VCPIP1Q96JH7 1222 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 VPS33BQ9H267 617 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 SLC9A2Q9UBY0 812 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 AGO2Q9UKV8 859 aaKnown RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 USP15Q9Y4E8 981 aaPredicted RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 DOCK1Q14185 1865 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 PHIPQ8WWQ0 1821 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 CETPP11597 493 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 BRAFP15056 766 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 GNA15P30679 374 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 RDXP35241 583 aaKnown RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 ACOT2P49753 483 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 ACTR2P61160 394 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 MPP2Q14168 576 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 MTERF2Q49AM1 385 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 IZUMO3Q5VZ72 239 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 CRELD2Q6UXH1 353 aaPredicted RBP17.28■□□□□ 0.36
LTBR-201ENST00000228918 ABHD15Q6UXT9 468 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 CYP4X1Q8N118 509 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 ANKRD42Q8N9B4 389 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 REPS2Q8NFH8 660 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 MAGEC3Q8TD91 643 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 FAM212AQ96EL1 285 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 HAPLN2Q9GZV7 340 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 KCNK9Q9NPC2 374 aa17.28■□□□□ 0.36
LTBR-201ENST00000228918 PCDHB4Q9Y5E5 795 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms