RNA–Protein interactions for RNA: ENST00000225504.7

SUPT4H1-201, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT4H1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-201ENST00000225504 MED15Q96RN5 788 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 GTPBP4Q9BZE4 634 aaKnown RBP15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 MTMR12Q9C0I1 747 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 SIX4Q9UIU6 781 aa15.58■□□□□ 0.08
SUPT4H1-201ENST00000225504 SF3B1O75533 1304 aaKnown RBP eCLIP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 PSMA7O14818 248 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 CNPP09543 421 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 RPL17P18621 184 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 FGFR3P22607 806 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 TKTP29401 623 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 GLUD2P49448 558 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 LILRA4P59901 499 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 SKIV2LQ15477 1246 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 C1orf220Q5T0J3 134 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 KIAA1841Q6NSI8 718 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 NT5DC4Q86YG4 428 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 TRIML1Q8N9V2 468 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 VN1R2Q8NFZ6 395 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 CACTINQ8WUQ7 758 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 NELFBQ8WX92 580 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 BORCS6Q96GS4 357 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 KLHL5Q96PQ7 755 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 MRPL17Q9NRX2 175 aaKnown RBP15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 AGAP1Q9UPQ3 857 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 CTNND2Q9UQB3 1225 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 NUB1Q9Y5A7 615 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 IRAK3Q9Y616 596 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 VWA8A3KMH1 1905 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 SCN1AP35498 2009 aa15.57■□□□□ 0.08
SUPT4H1-201ENST00000225504 LRRIQ3A6PVS8 624 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 CLASP2O75122 1294 aaKnown RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 CST3P01034 146 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 ITGB3P05106 788 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 TNNI1P19237 187 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 RPL13P26373 211 aaKnown RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 STIM1Q13586 685 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 SURF1Q15526 300 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 DUSP6Q16828 381 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 DUOXA2Q1HG44 320 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 TTI2Q6NXR4 508 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 WDR49Q8IV35 697 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 LNX1Q8TBB1 728 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 SUSD3Q96L08 255 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 FNBP1Q96RU3 617 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 CGRRF1Q99675 332 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 TTPALQ9BTX7 342 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 TMEM63CQ9P1W3 806 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 FRMD4BQ9Y2L6 1034 aa15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 TIMM13Q9Y5L4 95 aaPredicted RBP15.56■□□□□ 0.08
SUPT4H1-201ENST00000225504 CETN3O15182 167 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 TEX28O15482 410 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 ADAM12O43184 909 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 MBD3O95983 291 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 URODP06132 367 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 TMEM191BP0C7N4 346 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 POLR2BP30876 1174 aaKnown RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 PSMC2P35998 433 aaKnown RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 LTBRP36941 435 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 AARSP49588 968 aaKnown RBP eCLIP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 CLDN10P78369 228 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 DLX2Q07687 328 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 ELAVL2Q12926 359 aaKnown RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 ADAM15Q13444 863 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 RSPO2Q6UXX9 243 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 RBM43Q6ZSC3 357 aaKnown RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 TRAPPC11Q7Z392 1133 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 GLYCTKQ8IVS8 523 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 ZC3H3Q8IXZ2 948 aaKnown RBP15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 FAM186BQ8IYM0 893 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 TMC2Q8TDI7 906 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 TSG101Q99816 390 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 RXFP1Q9HBX9 757 aa15.55■□□□□ 0.08
SUPT4H1-201ENST00000225504 M0QZQ0 153 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 TRAPPC3O43617 180 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 SLC34A2O95436 690 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 GLP2RO95838 553 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 KRT19P08727 400 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 VAMP7P51809 220 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 NLRP12P59046 1061 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 FKBP3Q00688 224 aaKnown RBP15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 LRRC63Q05C16 580 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 KCNC3Q14003 757 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 BMS1Q14692 1282 aaKnown RBP15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 COL19A1Q14993 1142 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 CTC1Q2NKJ3 1217 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 DPCR1Q3MIW9 517 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 LLGL2Q6P1M3 1020 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 DSTYKQ6XUX3 929 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 EP400NLQ6ZTU2 488 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 SLC22A17Q8WUG5 538 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 ELMO3Q96BJ8 720 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 ANKRD36BP1Q96IX9 119 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 SENP8Q96LD8 212 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 CLSTN3Q9BQT9 956 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 CLDND1Q9NY35 253 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 STK39Q9UEW8 545 aa15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.54■□□□□ 0.08
SUPT4H1-201ENST00000225504 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms