RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 PLVAPQ9BX97 442 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 MTUS1Q9ULD2 1270 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 HLA-DRAP01903 254 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 C4BPAP04003 597 aaKnown RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 MYBL1P10243 752 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 PYGMP11217 842 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 DRD4P21917 467 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 TCF7P36402 384 aaPredicted RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 PIK3CAP42336 1068 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 MMP13P45452 471 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 NLRP11P59045 1033 aaKnown RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 PPARDQ03181 441 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 DPY19L2Q6NUT2 758 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 CCDC137Q6PK04 289 aaKnown RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 CABS1Q96KC9 395 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 FAM167AQ96KS9 214 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 FAM129AQ9BZQ8 928 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 TMEM134Q9H6X4 195 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 ACTR5Q9H9F9 607 aaPredicted RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 TXNRD2Q9NNW7 524 aa23.68■■□□□ 1.38
CCDC9-201ENST00000221922 AVENQ9NQS1 362 aaPredicted RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 MTRF1LQ9UGC7 380 aaKnown RBP23.68■■□□□ 1.38
CCDC9-201ENST00000221922 DNAJC25-GNG10A0A024R161 153 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 SOCS7O14512 581 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 OSBPP22059 807 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 SLC29A2Q14542 456 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 SWT1Q5T5J6 900 aaKnown RBP23.67■■□□□ 1.38
CCDC9-201ENST00000221922 SLC13A5Q86YT5 568 aaPredicted RBP23.67■■□□□ 1.38
CCDC9-201ENST00000221922 CCDC13Q8IYE1 715 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 CACNA2D3Q8IZS8 1091 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 OPTNQ96CV9 577 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 SYT17Q9BSW7 474 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 R3HDMLQ9H3Y0 253 aa23.67■■□□□ 1.38
CCDC9-201ENST00000221922 CHORDC1Q9UHD1 332 aaPredicted RBP23.67■■□□□ 1.38
CCDC9-201ENST00000221922 EPHX2P34913 555 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 RWDD2BP57060 319 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 SIX1Q15475 284 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 MDM1Q8TC05 714 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 RBAKQ9NYW8 714 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 MAFO75444 373 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 UNGP13051 313 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 COILP38432 576 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 GTF2A1P52655 376 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 C6orf118Q5T5N4 469 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 GKAP1Q5VSY0 366 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 TDRD10Q5VZ19 366 aaKnown RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 C12orf50Q8NA57 414 aaPredicted RBP23.66■■□□□ 1.38
CCDC9-201ENST00000221922 ART4Q93070 314 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 CHMP6Q96FZ7 201 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 MSTO1Q9BUK6 570 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 OSBPL7Q9BZF2 842 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 ADAM7Q9H2U9 754 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 SEMA4AQ9H3S1 761 aa23.66■■□□□ 1.38
CCDC9-201ENST00000221922 ACOT2P49753 483 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 ADCY2Q08462 1091 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 KCTD2Q14681 263 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 SLMAPQ14BN4 828 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 LY6KQ17RY6 165 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 AZI2Q9H6S1 392 aa23.65■■□□□ 1.38
CCDC9-201ENST00000221922 TCRBV7S2A1N4TA0A589 114 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 LGR5O75473 907 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 AGTP01019 485 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 PGK2P07205 417 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 GPAT2Q6NUI2 795 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 CRELD2Q6UXH1 353 aaPredicted RBP23.64■■□□□ 1.38
CCDC9-201ENST00000221922 TRIM72Q6ZMU5 477 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 CPLX4Q7Z7G2 160 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 P3H4Q92791 437 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 BTBD6Q96KE9 485 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 ZNF317Q96PQ6 595 aaPredicted RBP23.64■■□□□ 1.38
CCDC9-201ENST00000221922 MMP19Q99542 508 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 CGRRF1Q99675 332 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 MROH8Q9H579 483 aa23.64■■□□□ 1.38
CCDC9-201ENST00000221922 A0A0B4J269 797 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 LOC102724159A0A0B4J2E5 919 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 ARIH2O95376 493 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 RARAP10276 462 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 RARGP13631 454 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 CAPSQ13938 189 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 PWP2Q15269 919 aaKnown RBP23.64■■□□□ 1.37
CCDC9-201ENST00000221922 Q3C1V9 767 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 LACTB2Q53H82 288 aaPredicted RBP23.64■■□□□ 1.37
CCDC9-201ENST00000221922 TNFAIP8L3Q5GJ75 292 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 LMBRD2Q68DH5 695 aaPredicted RBP23.64■■□□□ 1.37
CCDC9-201ENST00000221922 EEPD1Q7L9B9 569 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 MCOLN2Q8IZK6 566 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 HAPLN2Q9GZV7 340 aa23.64■■□□□ 1.37
CCDC9-201ENST00000221922 RGS16O15492 202 aaPredicted RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ADCY3O60266 1144 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 RASSF9O75901 435 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 CHN1P15882 459 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 TBXAS1P24557 533 aaPredicted RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 MAPK4P31152 587 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 CELF3Q5SZQ8 465 aaKnown RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 PPP1R2P3Q6NXS1 205 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ATXN2LQ8WWM7 1075 aaKnown RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ELMO3Q96BJ8 720 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 GPR20Q99678 358 aa23.63■■□□□ 1.37
CCDC9-201ENST00000221922 TARS2Q9BW92 718 aaKnown RBP23.63■■□□□ 1.37
CCDC9-201ENST00000221922 ANAPC7Q9UJX3 599 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms