RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 AMHR2Q16671 573 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 NBPF20Q3BBV1 942 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 EPC2Q52LR7 807 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 C10orf76Q5T2E6 689 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PDXDC1Q6P996 788 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 RNF19AQ9NV58 838 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 MORC2Q9Y6X9 1032 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 SARSP49591 514 aaKnown RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 GUCY2DQ02846 1103 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PDE1CQ14123 709 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 RBM43Q6ZSC3 357 aaKnown RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 RBBP8NLQ8NC74 664 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PPTC7Q8NI37 304 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF507Q8TCN5 953 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ADAM21Q9UKJ8 722 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 MAGED2Q9UNF1 606 aaPredicted RBP9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF148Q9UQR1 794 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PPME1Q9Y570 386 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 C2CD2LO14523 706 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 CHUKO15111 745 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PRPSAP2O60256 369 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 SKIP12755 728 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 PSMA2P25787 234 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 MTF1Q14872 753 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 ALS2CLQ60I27 953 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 TOGARAM2Q6ZUX3 1019 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 SV2AQ7L0J3 742 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 DNAJC19Q96DA6 116 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 TMEM169Q96HH4 297 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 NIF3L1Q9GZT8 377 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 DPP3Q9NY33 737 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 THEGQ9P2T0 379 aa9.98□□□□□ -0.81
CCDC113-201ENST00000219299 IGF2BP3O00425 579 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ZC3H11AO75152 810 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 DUSP11O75319 330 aaKnown RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SMPD1P17405 629 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 CCL23P55773 120 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 DYNLT1P63172 113 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 GPC5P78333 572 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 COG7P83436 770 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SLMAPQ14BN4 828 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SH3RF1Q7Z6J0 888 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 TAS1R2Q8TE23 839 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SH3TC2Q8TF17 1288 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 RSAD2Q8WXG1 361 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 INTS9Q9NV88 658 aaKnown RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 POMCP01189 267 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 PPP6R3Q5H9R7 873 aaPredicted RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 PDZD4Q76G19 769 aaPredicted RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 FAF1Q9UNN5 650 aaPredicted RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 NID2Q14112 1375 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 THP07101 528 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ASGR1P07306 291 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 RGS7P49802 495 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 TAF6P49848 677 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 RHOT2Q8IXI1 618 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 KIAA0319LQ8IZA0 1049 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 AFAP1L2Q8N4X5 818 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SLC30A5Q8TAD4 765 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 CCHCR1Q8TD31 782 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 HASPINQ8TF76 798 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SLC12A6Q9UHW9 1150 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SCINQ9Y6U3 715 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 EIF3CLB5ME19 914 aaKnown RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 H7C0C1 242 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 MAFO75444 373 aaPredicted RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ZWINTO95229 277 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ATP5OP48047 213 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SLC27A1Q6PCB7 646 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ZPBP2Q6X784 338 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 PPP1R21Q6ZMI0 780 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 TRAPPC11Q7Z392 1133 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 CCDC13Q8IYE1 715 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 EIF3CQ99613 913 aaKnown RBP9.97□□□□□ -0.81
CCDC113-201ENST00000219299 ADAM2Q99965 735 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 NT5C1AQ9BXI3 368 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 IFT122Q9HBG6 1241 aa9.97□□□□□ -0.81
CCDC113-201ENST00000219299 SEPT4O43236 478 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF862O60290 1169 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 MMP3P08254 477 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 FAM102AQ5T9C2 384 aaPredicted RBP9.96□□□□□ -0.81
CCDC113-201ENST00000219299 RILPQ96NA2 401 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 GCNAQ96QF7 691 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ZWILCHQ9H900 591 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 CNOT10Q9H9A5 744 aaKnown RBP9.96□□□□□ -0.81
CCDC113-201ENST00000219299 VPS37BQ9H9H4 285 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 RNF14Q9UBS8 474 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 DIS3Q9Y2L1 958 aaKnown RBP9.96□□□□□ -0.81
CCDC113-201ENST00000219299 HES2Q9Y543 173 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 CDY2AQ9Y6F7 541 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 INHAP05111 366 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ARL4AP40617 200 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 FSTL1Q12841 308 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ITGA7Q13683 1181 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 SKIV2LQ15477 1246 aaKnown RBP9.96□□□□□ -0.81
CCDC113-201ENST00000219299 KLHDC7AQ5VTJ3 777 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 TRIM65Q6PJ69 517 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ZNF410Q86VK4 478 aa9.96□□□□□ -0.81
CCDC113-201ENST00000219299 ZBTB10Q96DT7 871 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms