RNA–Protein interactions for RNA: ENST00000219084.10

CHD9-201, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best)

Gene CHD9, Length 8,739 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-201ENST00000219084 NBPF3Q9H094 633 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 DDX47Q9H0S4 455 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 MINPP1Q9UNW1 487 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 DENND3A2RUS2 1198 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 POTEMA6NI47 508 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SNTNA6NMZ2 147 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SPDYE16A6NNV3 312 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 BTNL10A8MVZ5 291 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 NCAM2O15394 837 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MAGEB2O15479 319 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 EXTL3O43909 919 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PDHA1P08559 390 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RARGP13631 454 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 MAP4P27816 1152 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 TYK2P29597 1187 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CYTH1Q15438 398 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 IMPG1Q17R60 797 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SPDYE2Q495Y8 402 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 JAMLQ86YT9 394 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SH3RF3Q8TEJ3 882 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 FAM149B1Q96BN6 582 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 COA7Q96BR5 231 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 BRD8Q9H0E9 1235 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KRCC1Q9NPI7 259 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 ADA2Q9NZK5 511 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PCDHA10Q9Y5I2 948 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ZNF839A8K0R7 811 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PRKAB2O43741 272 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KDM1AO60341 852 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SYF2O95926 243 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 CD4P01730 458 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SERPINB3P29508 390 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ATP6V1E1P36543 226 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 EIF3EP60228 445 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 STX3Q13277 289 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 UGT3A1Q6NUS8 523 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 VCPIP1Q96JH7 1222 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SH3GL1Q99961 368 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 POLR3FQ9H1D9 316 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 ZC3H7BQ9UGR2 993 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 GTF3C4Q9UKN8 822 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 AGO2Q9UKV8 859 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 TMCO1Q9UM00 188 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KLHL41O60662 606 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ZNF568Q3ZCX4 644 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 C12orf60Q5U649 245 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 CRELD2Q6UXH1 353 aaPredicted RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 DPP9Q86TI2 863 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 LONP2Q86WA8 852 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 FUT8Q9BYC5 575 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SMYD3Q9H7B4 428 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SAR1AQ9NR31 198 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 GTSE1Q9NYZ3 720 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 HSPBP1Q9NZL4 362 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 HPSEQ9Y251 543 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ATRNO75882 1429 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SAC3D1A6NKF1 404 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 E5RI56 91 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 SUPT3HO75486 399 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 PNPLA4P41247 253 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ATG9AQ7Z3C6 839 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 KIAA0825Q8IV33 1275 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RBBP8Q99708 897 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 RIC8BQ9NVN3 520 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 WARS2Q9UGM6 360 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 XPO7Q9UIA9 1087 aaKnown RBP4.63□□□□□ -1.67
CHD9-201ENST00000219084 GINS2Q9Y248 185 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 ANKRD6Q9Y2G4 727 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 FHOD1Q9Y613 1164 aa4.63□□□□□ -1.67
CHD9-201ENST00000219084 TMEM120BA0PK00 339 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 KIF28PB7ZC32 967 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CFLARO15519 480 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 GARTP22102 1010 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 HSD17B3P37058 310 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ARID5BQ14865 1188 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 FAM98CQ17RN3 349 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 TFDP3Q5H9I0 405 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RHPN2Q8IUC4 686 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SP8Q8IXZ3 490 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ELMOD1Q8N336 334 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 UHMK1Q8TAS1 419 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 SNX19Q92543 992 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PCIF1Q9H4Z3 704 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 COG4Q9H9E3 785 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TMBIM4Q9HC24 238 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TRPC7Q9HCX4 862 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SLC40A1Q9NP59 571 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 ZBTB1Q9Y2K1 713 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 CNTNAP5Q8WYK1 1306 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 PPP1R3GB7ZBB8 358 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 TIMM44O43615 452 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 VPS4BO75351 444 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RPS6KA4O75676 772 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 FSBPO95073 299 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 NQO1P15559 274 aaKnown RBP4.62□□□□□ -1.67
CHD9-201ENST00000219084 GRK2P25098 689 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 DNAJB2P25686 324 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 RPA1P27694 616 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 SOX6P35712 828 aa4.62□□□□□ -1.67
CHD9-201ENST00000219084 GCLMP48507 274 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms