RNA–Protein interactions for RNA: ENST00000218388.8

TIMP1-201, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP1, Length 892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-201ENST00000218388 LCHNA4D1U4 455 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 LINC01553A4QN01 128 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 LRRC10BA6NIK2 292 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 TMEM189-UBE2V1I3L0A0 370 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 NRP1O14786 923 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 B3GAT3O94766 335 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 TPM3P06753 285 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 CA3P07451 260 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 GALTP07902 379 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 ATP1A3P13637 1013 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 ATICP31939 592 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 SLC11A1P49279 550 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 TAF6P49848 677 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 COPB1P53618 953 aaKnown RBP14.19□□□□□ -0.14
TIMP1-201ENST00000218388 LRIT3Q3SXY7 679 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 SV2CQ496J9 727 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 KCNT2Q6UVM3 1135 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 C15orf39Q6ZRI6 1047 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 COLGALT1Q8NBJ5 622 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 FBXL13Q8NEE6 735 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 PLVAPQ9BX97 442 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 VPS16Q9H269 839 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 COLQQ9Y215 455 aaPredicted RBP14.19□□□□□ -0.14
TIMP1-201ENST00000218388 PRG3Q9Y2Y8 225 aaPredicted RBP14.19□□□□□ -0.14
TIMP1-201ENST00000218388 NUB1Q9Y5A7 615 aa14.19□□□□□ -0.14
TIMP1-201ENST00000218388 LGALS16A8MUM7 142 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 PIRO00625 290 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 TRAPPC3O43617 180 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 TADA2AO75478 443 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 HLA-DRAP01903 254 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 MYOGP15173 224 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 CTNNB1P35222 781 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 ELAVL2Q12926 359 aaKnown RBP14.18□□□□□ -0.14
TIMP1-201ENST00000218388 SGSM1Q2NKQ1 1148 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 ZNF699Q32M78 642 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 CBWD6Q4V339 395 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 WDR44Q5JSH3 913 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 CBWD3Q5JTY5 395 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 MIIPQ5JXC2 388 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 CBWD5Q5RIA9 395 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 PPP2R2DQ66LE6 453 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 GBP6Q6ZN66 633 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 GAS2L3Q86XJ1 694 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 TAF4BQ92750 862 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 TMEM169Q96HH4 297 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 TGS1Q96RS0 853 aaKnown RBP14.18□□□□□ -0.14
TIMP1-201ENST00000218388 RBSNQ9H1K0 784 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 SLC28A3Q9HAS3 691 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 RAB20Q9NX57 234 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 SPG21Q9NZD8 308 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 HCSTQ9UBK5 93 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 SIX4Q9UIU6 781 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 ADAM28Q9UKQ2 775 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 YBX2Q9Y2T7 364 aaKnown RBP14.18□□□□□ -0.14
TIMP1-201ENST00000218388 COQ4Q9Y3A0 265 aa14.18□□□□□ -0.14
TIMP1-201ENST00000218388 SF3B1O75533 1304 aaKnown RBP eCLIP14.17□□□□□ -0.14
TIMP1-201ENST00000218388 CBFA2T2O43439 604 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 B4GALT3O60512 393 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 KIF4AO95239 1232 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 STAU1O95793 577 aaKnown RBP14.17□□□□□ -0.14
TIMP1-201ENST00000218388 RB1P06400 928 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 P4HA1P13674 534 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 DNAJB2P25686 324 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 BMPR1AP36894 532 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 PBX2P40425 430 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 FANCCQ00597 558 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 KRT17Q04695 432 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 EXOC3L4Q17RC7 722 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 UVSSAQ2YD98 709 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 SLC39A11Q8N1S5 342 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 TAS1R2Q8TE23 839 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 TIFAQ96CG3 184 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 IGSF21Q96ID5 467 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 HPDLQ96IR7 371 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 FAM84AQ96KN4 292 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 PAAF1Q9BRP4 392 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 NKX2-4Q9H2Z4 354 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 GCNT4Q9P109 453 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 CACNG4Q9UBN1 327 aa14.17□□□□□ -0.14
TIMP1-201ENST00000218388 KPNA7A9QM74 516 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 NT5C1B-RDH14C9J2C7 533 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 VNN1O95497 513 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 CST3P01034 146 aaPredicted RBP14.16□□□□□ -0.14
TIMP1-201ENST00000218388 PBX3P40426 434 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 UBASH3AP57075 661 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 LILRA4P59901 499 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 MYL6P60660 151 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 TNNC1P63316 161 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 TAP1Q03518 808 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 UBXN1Q04323 297 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 EPC2Q52LR7 807 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 ZNF667Q5HYK9 610 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 DSTYKQ6XUX3 929 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 CXorf38Q8TB03 319 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 C11orf84Q9BUA3 381 aaPredicted RBP14.16□□□□□ -0.14
TIMP1-201ENST00000218388 VRTNQ9H8Y1 702 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 MARCH5Q9NX47 278 aa14.16□□□□□ -0.14
TIMP1-201ENST00000218388 SCN1AP35498 2009 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 A0A1B0GTH6 734 aa14.15□□□□□ -0.14
TIMP1-201ENST00000218388 C5orf67F2Z3F1 127 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms