RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 PBX2P40425 430 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 BCAR1P56945 870 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 MYL6P60660 151 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 FKBP15Q5T1M5 1219 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 HASPINQ8TF76 798 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 SEMA4DQ92854 862 aa29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 DDX27Q96GQ7 796 aaKnown RBP29.36■■■□□ 2.29
CHMP4B-201ENST00000217402 A0A1B0GTH6 734 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 NT5C1B-RDH14C9J2C7 533 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 UBASH3AP57075 661 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 UBXN1Q04323 297 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 CETN1Q12798 172 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 C3orf58Q8NDZ4 430 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 TMEM175Q9BSA9 504 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 PI4K2AQ9BTU6 479 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 RTN4Q9NQC3 1192 aaKnown RBP29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 GCNT4Q9P109 453 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 PCDHA11Q9Y5I1 949 aa29.35■■■□□ 2.29
CHMP4B-201ENST00000217402 PIRO00625 290 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 NRP1O14786 923 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 P4HA2O15460 535 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 B3GAT3O94766 335 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 KIF4AO95239 1232 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 CA3P07451 260 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 GALTP07902 379 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 ALDH7A1P49419 539 aaKnown RBP29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 EPC2Q52LR7 807 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 PBX4Q9BYU1 374 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 RAB20Q9NX57 234 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 FAN1Q9Y2M0 1017 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 YBX2Q9Y2T7 364 aaKnown RBP29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 AP5Z1O43299 807 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 ALDH2P05091 517 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 LAG3P18627 525 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 PTPN21Q16825 1174 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 HPDLQ96IR7 371 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 ZNF558Q96NG5 402 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 COQ4Q9Y3A0 265 aa29.34■■■□□ 2.29
CHMP4B-201ENST00000217402 GBF1Q92538 1859 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 LINC01553A4QN01 128 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 GOLGA6L3A6NEY3 463 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 PMM2O15305 246 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 TEX33O43247 280 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 ARHGEF15O94989 841 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 ITGB1P05556 798 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 UVSSAQ2YD98 709 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 KCNT2Q6UVM3 1135 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 GBP6Q6ZN66 633 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 LRRC52Q8N7C0 313 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 COLGALT1Q8NBJ5 622 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 ZNF560Q96MR9 790 aa29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 XPO4Q9C0E2 1151 aaKnown RBP29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 COLQQ9Y215 455 aaPredicted RBP29.33■■■□□ 2.29
CHMP4B-201ENST00000217402 LINC00271P0C7V0 271 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 EXOC3L4Q17RC7 722 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 ZNF699Q32M78 642 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 DCLRE1AQ6PJP8 1040 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 TMEM173Q86WV6 379 aaPredicted RBP29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 IMPG2Q9BZV3 1241 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 INTS2Q9H0H0 1204 aaKnown RBP29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 XYLT2Q9H1B5 865 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 NUB1Q9Y5A7 615 aa29.32■■■□□ 2.28
CHMP4B-201ENST00000217402 GTPBP10A4D1E9 387 aaKnown RBP29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 TAF6P49848 677 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 MYO1EQ12965 1108 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 SPOPLQ6IQ16 392 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 CLP1Q92989 425 aaKnown RBP29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 COLEC11Q9BWP8 271 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 MARCH5Q9NX47 278 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 MSRAQ9UJ68 235 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 KIAA1671Q9BY89 1806 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 SPTLC1O15269 473 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 PNPLA4P41247 253 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 LRMPQ12912 555 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 RAB30Q15771 203 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 SPRED2Q7Z698 418 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 CCDC150Q8NCX0 1101 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 BCL7CQ8WUZ0 217 aaPredicted RBP29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 AAASQ9NRG9 546 aa29.31■■■□□ 2.28
CHMP4B-201ENST00000217402 LAMA3Q16787 3333 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 ASS1P00966 412 aaKnown RBP29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 SLC9A1P19634 815 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 LILRA4P59901 499 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 NR1I3Q14994 352 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 SGSM1Q2NKQ1 1148 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 SARM1Q6SZW1 724 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 CD300LGQ6UXG3 332 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 EHBP1Q8NDI1 1231 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 LMO3Q8TAP4 145 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 TRIM5Q9C035 493 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 NKX2-4Q9H2Z4 354 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 MTUS1Q9ULD2 1270 aa29.3■■■□□ 2.28
CHMP4B-201ENST00000217402 SCN1AP35498 2009 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 FSD2A1L4K1 749 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 I3L4J1 428 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 TADA2AO75478 443 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 ATICP31939 592 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 CTNNB1P35222 781 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 BRCC3P46736 316 aa29.29■■■□□ 2.28
CHMP4B-201ENST00000217402 KLK7P49862 253 aa29.29■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms