RNA–Protein interactions for RNA: ENST00000216774.10

SRP54-201, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRP54, Length 2,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-201ENST00000216774 CCHCR1Q8TD31 782 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 ZNF516Q92618 1163 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 BICD1Q96G01 975 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 MAGEB18Q96M61 343 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 OSBPL8Q9BZF1 889 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 NKIRAS1Q9NYS0 192 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 PRKAG3Q9UGI9 489 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 KCNG1Q9UIX4 513 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 AGAP1Q9UPQ3 857 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 SCINQ9Y6U3 715 aa14.14□□□□□ -0.15
SRP54-201ENST00000216774 STBD1O95210 358 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 CALCAP01258 141 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 KLRC2P26717 231 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 STX2P32856 288 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 NCALDP61601 193 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 SF3A3Q12874 501 aaKnown RBP eCLIP14.13□□□□□ -0.152e-10■■■■□ 21
SRP54-201ENST00000216774 STRN3Q13033 797 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 NR1H3Q13133 447 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 MPP2Q14168 576 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 IZUMO3Q5VZ72 239 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 TBC1D1Q86TI0 1168 aaPredicted RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 ZCCHC9Q8N567 271 aaKnown RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 ELMO3Q96BJ8 720 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 GRAMD1AQ96CP6 724 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 IFT74Q96LB3 600 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 TGS1Q96RS0 853 aaKnown RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 HEMGNQ9BXL5 484 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 ATP6V0A4Q9HBG4 840 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 RXFP1Q9HBX9 757 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 EURLQ9NYK6 297 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 GABBR1Q9UBS5 961 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 NAALADL1Q9UQQ1 740 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 A0A1B0GUA9 196 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 ZNF862O60290 1169 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 HLA-DRAP01903 254 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 FDX1P10109 184 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 NQO1P15559 274 aaKnown RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 ACO1P21399 889 aaKnown RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 CCND2P30279 289 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 CETN2P41208 172 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 COPS2P61201 443 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 MAMLD1Q13495 774 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 PLEKHA7Q6IQ23 1121 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 TAS1R3Q7RTX0 852 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 PHF13Q86YI8 300 aaPredicted RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 ABRAQ8N0Z2 381 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 ANKRD35Q8N283 1001 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 TCP11Q8WWU5 503 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 FNBP1Q96RU3 617 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 CXorf56Q9H5V9 222 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 ECT2Q9H8V3 914 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 DNAJC17Q9NVM6 304 aaKnown RBP14.13□□□□□ -0.15
SRP54-201ENST00000216774 ADAM22Q9P0K1 906 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 BAIAP2L1Q9UHR4 511 aa14.13□□□□□ -0.15
SRP54-201ENST00000216774 NFASCO94856 1347 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ZBED4O75132 1171 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 APBA3O96018 575 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 GH1P01241 217 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 C4BPAP04003 597 aaKnown RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 CLTAP09496 248 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 PIK3CAP42336 1068 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 VPS41P49754 854 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 SOX10P56693 466 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 NOMO3P69849 1222 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 C1QBPQ07021 282 aaKnown RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 VSIG10LQ86VR7 867 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 RTKN2Q8IZC4 609 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CYP4X1Q8N118 509 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 KCNN1Q92952 543 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 GINM1Q9NU53 330 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CTDP1Q9Y5B0 961 aaPredicted RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 STYXL1Q9Y6J8 313 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ARID2Q68CP9 1835 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 PSAPP07602 524 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CETPP11597 493 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ALADP13716 330 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 LIG4P49917 911 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 TAS2R40P59535 323 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CCDC15Q0P6D6 951 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CUL2Q13617 745 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ACVR2BQ13705 512 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 MTFR1Q15390 333 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 TDRD10Q5VZ19 366 aaKnown RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 RNF43Q68DV7 783 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 DRICH1Q6PGQ1 229 aaPredicted RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 PNMA8AQ86V59 439 aaPredicted RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 SRRM1Q8IYB3 904 aaKnown RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 GPATCH11Q8N954 259 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 AGBL3Q8NEM8 1001 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 GDAP1Q8TB36 358 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ZBED3Q96IU2 234 aaPredicted RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 CFAP57Q96MR6 1250 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 UBN1Q9NPG3 1134 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 XPNPEP1Q9NQW7 623 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 CNTN6Q9UQ52 1028 aa14.12□□□□□ -0.15
SRP54-201ENST00000216774 ZBTB12Q9Y330 459 aaPredicted RBP14.12□□□□□ -0.15
SRP54-201ENST00000216774 TNNI1P19237 187 aa14.11□□□□□ -0.15
SRP54-201ENST00000216774 DSG3P32926 999 aa14.11□□□□□ -0.15
SRP54-201ENST00000216774 SKIV2L2P42285 1042 aaKnown RBP14.11□□□□□ -0.15
SRP54-201ENST00000216774 MAGEA4P43358 317 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms