RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 A0A087X0T9 212 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 IQCMA0A1B0GVH7 501 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 A0A1W2PQ27 194 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 A0A1W2PQ64 194 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 A0A1W2PQD8 194 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 FAM47E-STBD1D6RA91 191 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 CPB1P15086 417 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 GUCY1A2P33402 732 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 PHKA2P46019 1235 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 TYW3Q6IPR3 259 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 PCMTD2Q9NV79 361 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 MAP3K20Q9NYL2 800 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 ATP10DQ9P241 1426 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 CBFBQ13951 182 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 NDUFAF6Q330K2 333 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 RC3H1Q5TC82 1133 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 TRIM65Q6PJ69 517 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 RGS12O14924 1447 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 USP19O94966 1318 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 TPP2P29144 1249 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 HOXC9P31274 260 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 CYP51A1Q16850 503 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 ARMC4Q5T2S8 1044 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 KRT74Q7RTS7 529 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 STKLD1Q8NE28 680 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 THUMPD3Q9BV44 507 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 CFAP43Q8NDM7 1665 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 ASNA1O43681 348 aa15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 SARSP49591 514 aaKnown RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 GIMAP8Q8ND71 665 aaPredicted RBP15.29■□□□□ 0.04
SPTLC2-201ENST00000216484 KLHL2O95198 593 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 CNTN1Q12860 1018 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 LPIN1Q14693 890 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 RSBN1Q5VWQ0 802 aaPredicted RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 BTBD8Q5XKL5 378 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MTHFD1LQ6UB35 978 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 ADI1Q9BV57 179 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 KLHL11Q9NVR0 708 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 CYBBP04839 570 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 RPN2P04844 631 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 EIF2AK2P19525 551 aaKnown RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MTMR1Q13613 665 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MARCH10Q8NA82 808 aaPredicted RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 C11orf70Q9BRQ4 267 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 VTA1Q9NP79 307 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 CTTNBP2Q8WZ74 1663 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 TAF4O00268 1085 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MFAP3LO75121 409 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MFN2O95140 757 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MIGA2Q7L4E1 593 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 AATKQ6ZMQ8 1374 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MZF1P28698 734 aaPredicted RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 C14orf93Q9H972 538 aaKnown RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 RALGDSQ12967 914 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 PPIEQ9UNP9 301 aaKnown RBP15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 TERB1Q8NA31 727 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 MCRS1Q96EZ8 462 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 CCDC17Q96LX7 622 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF862O60290 1169 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 RHOT1Q8IXI2 618 aa15.28■□□□□ 0.04
SPTLC2-201ENST00000216484 STX7O15400 261 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 USP10Q14694 798 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 HDAC6Q9UBN7 1215 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 MORC2Q9Y6X9 1032 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 ZNF804BA4D1E1 1349 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 RGS4P49798 205 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 VAMP7P51809 220 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 MICALL2Q8IY33 904 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 PIGSQ96S52 555 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 DBR1Q9UK59 544 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 SRPRBQ9Y5M8 271 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 IFT140Q96RY7 1462 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 YWHAQP27348 245 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 PIK3R1P27986 724 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 POU1F1P28069 291 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 NOS3P29474 1203 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 BCAP31P51572 246 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 EIF2B5Q13144 721 aaKnown RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 HIC2Q96JB3 615 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 QKIQ96PU8 341 aaKnown RBP eCLIP15.27■□□□□ 0.049e-7■■■■■ 35.7
SPTLC2-201ENST00000216484 ZNF624Q9P2J8 865 aaPredicted RBP15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 PPP2R3BQ9Y5P8 575 aa15.27■□□□□ 0.04
SPTLC2-201ENST00000216484 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 PARNO95453 639 aaKnown RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 GGPS1O95749 300 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 ZNF57Q68EA5 555 aaPredicted RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 ATPAF2Q8N5M1 289 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 SEC16BQ96JE7 1060 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 BHMT2Q9H2M3 363 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 GRID2IPA4D2P6 1211 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 AKAP5P24588 427 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 GALNTL6Q49A17 601 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 IL31Q6EBC2 164 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 CHAMP1Q96JM3 812 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 FAM129BQ96TA1 746 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 DDX47Q9H0S4 455 aaKnown RBP15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 RPS6KB2Q9UBS0 482 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 SLC25A13Q9UJS0 675 aa15.27■□□□□ 0.03
SPTLC2-201ENST00000216484 PNMA3Q9UL41 463 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms