RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ZBTB7AO95365 584 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 CST3P01034 146 aaPredicted RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 ARSEP51690 589 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 STRN3Q13033 797 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 TUBB8Q3ZCM7 444 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 TDRD10Q5VZ19 366 aaKnown RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 TAOK1Q7L7X3 1001 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 DEFB132Q7Z7B7 95 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 RPAINQ86UA6 219 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 SYNCQ9H7C4 482 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 HOMER3Q9NSC5 361 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 RBAKQ9NYW8 714 aaPredicted RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 AGO2Q9UKV8 859 aaKnown RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 AGTPBP1Q9UPW5 1226 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 ZBED4O75132 1171 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 RARGP13631 454 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 CDH8P55286 799 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 FAXCQ5TGI0 409 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 MFSD7Q6UXD7 560 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 GPD1LQ8N335 351 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 CEP120Q8N960 986 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 ZNF317Q96PQ6 595 aaPredicted RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 NOD2Q9HC29 1040 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 TMEM8AQ9HCN3 771 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 IVNS1ABPQ9Y6Y0 642 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 NRAPQ86VF7 1730 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 A0A1W2PPM1 405 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 CES2O00748 559 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 CA4P22748 312 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 GTF2H1P32780 548 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 MMP13P45452 471 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 IRX4P78413 519 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 SEPT7Q16181 437 aaKnown RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 SGSM3Q96HU1 749 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 WRNIP1Q96S55 665 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 APOBEC3GQ9HC16 384 aaKnown RBP16.01■□□□□ 0.15
EFNB1-201ENST00000204961 KCNG1Q9UIX4 513 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 EXOC7Q9UPT5 735 aa16.01■□□□□ 0.15
EFNB1-201ENST00000204961 C2orf71A6NGG8 1288 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 TARSP26639 723 aaKnown RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 PSEN1P49768 467 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 SIX1Q15475 284 aaPredicted RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 PKN2Q16513 984 aaKnown RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 FAM160B2Q86V87 743 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 TTLL6Q8N841 843 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 NUB1Q9Y5A7 615 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 ZNF541Q9H0D2 1346 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 SSTR1P30872 391 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 ELF3P78545 371 aaPredicted RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 GTF2BQ00403 316 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 SLMAPQ14BN4 828 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 CLEC16AQ2KHT3 1053 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 BBS9Q3SYG4 887 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 ZC3H18Q86VM9 953 aaKnown RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16■□□□□ 0.15
EFNB1-201ENST00000204961 SNF8Q96H20 258 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 PITPNM3Q9BZ71 974 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 CNOT10Q9H9A5 744 aaKnown RBP16■□□□□ 0.15
EFNB1-201ENST00000204961 PXMP2Q9NR77 195 aa16■□□□□ 0.15
EFNB1-201ENST00000204961 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16■□□□□ 0.15
EFNB1-201ENST00000204961 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16■□□□□ 0.15
EFNB1-201ENST00000204961 EZRP15311 586 aaKnown RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 SLC15A2Q16348 729 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 FOXR2Q6PJQ5 311 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 RBBP8NLQ8NC74 664 aaPredicted RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 HSPH1Q92598 858 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 MTMR12Q9C0I1 747 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 XPNPEP1Q9NQW7 623 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 MAGED2Q9UNF1 606 aaPredicted RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 CNTNAP1P78357 1384 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 SLX4Q8IY92 1834 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 RGL2O15211 777 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 DIAPH2O60879 1101 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 PEX19P40855 299 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 PDIA2Q13087 525 aaKnown RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 MDH1BQ5I0G3 518 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 VSTM1Q6UX27 236 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 ART4Q93070 314 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 NLRP4Q96MN2 994 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 PLVAPQ9BX97 442 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 CALN1Q9BXU9 219 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 DCLK3Q9C098 648 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 ETNK1Q9HBU6 452 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 DONSONQ9NYP3 566 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 PDE4DIPQ5VU43 2346 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 AGTP01019 485 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 ALDH5A1P51649 535 aaPredicted RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 ACTR2P61160 394 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 C11orf63Q6NUN7 778 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 ANKRD35Q8N283 1001 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 CNKSR2Q8WXI2 1034 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 MOV10L1Q9BXT6 1211 aaKnown RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 HAO1Q9UJM8 370 aa15.99■□□□□ 0.15
EFNB1-201ENST00000204961 AHDC1Q5TGY3 1603 aaPredicted RBP15.99■□□□□ 0.15
EFNB1-201ENST00000204961 RASSF9O75901 435 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 TTC4O95801 387 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 SP2Q02086 613 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 MIS18BP1Q6P0N0 1132 aa15.98■□□□□ 0.15
EFNB1-201ENST00000204961 FITM2Q8N6M3 262 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms