RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 JADE1Q6IE81 842 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 SYCE2Q6PIF2 218 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 CYP26C1Q6V0L0 522 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 RTL10Q7L3V2 364 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 FAM213AQ9BRX8 229 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 COL25A1Q9BXS0 654 aaPredicted RBP18.88■□□□□ 0.61
MRPL28-201ENST00000199706 OXCT2Q9BYC2 517 aaPredicted RBP18.88■□□□□ 0.61
MRPL28-201ENST00000199706 GTPBP4Q9BZE4 634 aaKnown RBP18.88■□□□□ 0.61
MRPL28-201ENST00000199706 S1PR5Q9H228 398 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 PLEKHA4Q9H4M7 779 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 SFXN1Q9H9B4 322 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 SLC39A2Q9NP94 309 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 RBAKQ9NYW8 714 aaPredicted RBP18.88■□□□□ 0.61
MRPL28-201ENST00000199706 HSPBP1Q9NZL4 362 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 NUB1Q9Y5A7 615 aa18.88■□□□□ 0.61
MRPL28-201ENST00000199706 ARHGEF37A1IGU5 675 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 C2CD2LO14523 706 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 RBM10P98175 930 aaKnown RBP18.87■□□□□ 0.61
MRPL28-201ENST00000199706 MYBPC2Q14324 1141 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 SLC9A9Q8IVB4 645 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 APPL2Q8NEU8 664 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 NECTIN4Q96NY8 510 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 UHRF1Q96T88 793 aaPredicted RBP18.87■□□□□ 0.61
MRPL28-201ENST00000199706 POP1Q99575 1024 aaKnown RBP18.87■□□□□ 0.61
MRPL28-201ENST00000199706 ADAM7Q9H2U9 754 aa18.87■□□□□ 0.61
MRPL28-201ENST00000199706 HOOK1Q9UJC3 728 aaKnown RBP18.87■□□□□ 0.61
MRPL28-201ENST00000199706 DENND4AQ7Z401 1863 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 ZNF233A6NK53 670 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 PIRO00625 290 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 EPCAMP16422 314 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 MRPL58Q14197 206 aaKnown RBP18.86■□□□□ 0.61
MRPL28-201ENST00000199706 C9orf57Q5W0N0 161 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 LLGL2Q6P1M3 1020 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 LILRA6Q6PI73 481 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 C15orf39Q6ZRI6 1047 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 ADHFE1Q8IWW8 467 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 EFCAB13Q8IY85 973 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 SPATA20Q8TB22 786 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 SAAL1Q96ER3 474 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 B3GALT6Q96L58 329 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 CLSTN3Q9BQT9 956 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 RMND1Q9NWS8 449 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 PCDHB8Q9UN66 801 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 USP15Q9Y4E8 981 aaPredicted RBP18.86■□□□□ 0.61
MRPL28-201ENST00000199706 SCN1AP35498 2009 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 TSC2P49815 1807 aa18.86■□□□□ 0.61
MRPL28-201ENST00000199706 H7C4K7 107 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 PDXKO00764 312 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 TBC1D4O60343 1298 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 PRR29P0C7W0 189 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 IL9P15248 144 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 TKTP29401 623 aaKnown RBP18.85■□□□□ 0.61
MRPL28-201ENST00000199706 MCM4P33991 863 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 SPAG1Q07617 926 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 RAB33AQ14088 237 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 NFIL3Q16649 462 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 SLC8B1Q6J4K2 584 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 CES5AQ6NT32 575 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 CLEC17AQ6ZS10 378 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 GUF1Q8N442 669 aaKnown RBP18.85■□□□□ 0.61
MRPL28-201ENST00000199706 XXYLT1Q8NBI6 393 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 CACTINQ8WUQ7 758 aaKnown RBP18.85■□□□□ 0.61
MRPL28-201ENST00000199706 FAM212AQ96EL1 285 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 GSDMAQ96QA5 445 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 KCTD10Q9H3F6 313 aa18.85■□□□□ 0.61
MRPL28-201ENST00000199706 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 C19orf67A6NJJ6 358 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 PRPF40AO75400 957 aaKnown RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 OAZ2O95190 189 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 POU2F2P09086 479 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 TYMPP19971 482 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 IGFBP6P24592 240 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 PNPLA4P41247 253 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 MTHFRP42898 656 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 BRCC3P46736 316 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 LILRA4P59901 499 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 ZP2Q05996 745 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 CBX2Q14781 532 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 SNRNP35Q16560 246 aaKnown RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 COBLL1Q53SF7 1204 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 VARS2Q5ST30 1063 aaKnown RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 PRSS55Q6UWB4 352 aaPredicted RBP18.84■□□□□ 0.61
MRPL28-201ENST00000199706 CEP57Q86XR8 500 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 NELFCDQ8IXH7 590 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 MAN1C1Q9NR34 630 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 ZDHHC7Q9NXF8 308 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 DPP3Q9NY33 737 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 FBXW11Q9UKB1 542 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 ITGA11Q9UKX5 1188 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 MAFFQ9ULX9 164 aa18.84■□□□□ 0.61
MRPL28-201ENST00000199706 TGM5O43548 720 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 SMC2O95347 1197 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 HOXA9P31269 272 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 CLUL1Q15846 466 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 ZNF280DQ6N043 979 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 CBWD2Q8IUF1 395 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 WDR49Q8IV35 697 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 LRRC52Q8N7C0 313 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 ZSWIM2Q8NEG5 633 aa18.83■□□□□ 0.6
MRPL28-201ENST00000199706 RIPOR3Q96MK2 946 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms