RNA–Protein interactions for RNA: ENSMUST00000136980.7

Prpf40b-208, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40b, Length 3,047 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-208ENSMUST00000136980 Kndc1Q0KK55 1742 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm45194A0A140LJG2 572 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Calb1P12658 261 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Vcam1P29533 739 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 RalaP63321 206 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Calb2Q08331 271 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 RilpQ5ND29 369 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Sema5aQ62217 1077 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Q8BGC1 442 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Znf879Q8BI99 563 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tmco6Q8BQX5 494 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Lars2Q8VDC0 902 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ttc5Q99LG4 440 aa12.13□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Cntnap1O54991 1385 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Zfp612A0A1D5RMC2 672 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ttll3A4Q9E5 927 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Krt90E9Q1Z0 538 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Sar1aP36536 198 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ripk2P58801 539 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Usp46P62069 366 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Chrna5Q2MKA5 467 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Odr4Q4PJX1 447 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 B3gnt3Q5JCS9 372 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Grb10Q60760 621 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tfap2bQ61313 459 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tdpoz4Q6YCH2 370 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tmem117Q8BH18 514 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 IrgcQ8C262 412 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Uba6Q8C7R4 1053 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ier5lQ99J55 406 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Hsf2bpQ9D4G2 338 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Chd5A2A8L1 1946 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Myh11O08638 1972 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Arhgap42B2RQE8 841 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 DgkhD3YXJ0 1156 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 AgxtO35423 414 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 ArP19091 899 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Nedd1P33215 660 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Kbtbd3Q8BHI4 607 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Depdc1aQ8CIG0 804 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Mrgprx1Q8CIP3 322 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Klhl36Q8R124 613 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Usb1Q91W78 267 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Zbed3Q9D0L1 228 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Cib2Q9Z309 187 aa12.12□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Cntnap2Q9CPW0 1332 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm5926E9PWJ8 236 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Cyp4f40G3UW81 524 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 B020004C17RikJ3QP07 232 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Adcy7P51829 1099 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 GalcP54818 684 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 HarsQ61035 509 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 WaplQ65Z40 1200 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 E2f7Q6S7F2 904 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Rhbdf2Q80WQ6 827 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Znf18Q810A1 556 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tbc1d10cQ8C9V1 444 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Cd300ldQ8VCH2 221 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Yipf1Q91VU1 306 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 NwcQ9CQI4 244 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tex9Q9D845 387 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 IgtpQ9DCE9 423 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Rsc1a1Q9ER99 582 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Sfmbt1Q9JMD1 863 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Clec4aQ9QZ15 238 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Xbp1O35426 267 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Mdm4O35618 489 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 PigrO70570 771 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gbp1Q01514 589 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Spink5Q148R4 1017 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Atp13a5Q3TYU2 1216 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Rnf10Q3UIW5 804 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gas7Q60780 421 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Xlr3cQ61806 226 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Styk1Q6J9G1 429 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ccdc117Q6PB51 277 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ssxb5Q6XAS2 159 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Zswim6Q80TB7 1207 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ddx24Q9ESV0 857 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Tlr5Q9JLF7 859 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 NbnQ9R207 751 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm4907B1AXB9 411 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm1141B9EJU1 475 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm5795E9PZN8 263 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Magea4F2Z493 315 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm3264L7N2C5 238 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Ift81O35594 676 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 CopeO89079 308 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gad2P48320 585 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 LxnP70202 222 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Syce2Q505B8 171 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 N4bp1Q6A037 893 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gm9758Q80ZT2 255 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Appl2Q8K3G9 662 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Utp6Q8VCY6 597 aaKnown RBP12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Bbox1Q924Y0 387 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Sppl3Q9CUS9 384 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 4921524L21RikQ9D5T2 438 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Gabbr1Q9WV18 960 aa12.11□□□□□ -0.47
Prpf40b-208ENSMUST00000136980 Nup188Q6ZQH8 1759 aa12.1□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 12 ms