RNA–Protein interactions for RNA: ENSMUST00000086923.5

Col17a1-202, Transcript of Collagen alpha-1(XVII) chain, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Col17a1, Length 5,477 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1-202ENSMUST00000086923 Tuba4aP68368 448 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 UstQ8BUB6 407 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Lin52Q8CD94 116 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Dpp3Q99KK7 738 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Hars2Q99KK9 505 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Dppa5aQ9CQS7 118 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 1700123K08RikQ9D991 295 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 MeiocA2AG06 965 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ano3A2AHL1 981 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Gm17019K7N6W5 255 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Teddm2Q208S0 260 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Parp6Q6P6P7 630 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Usp49Q6P9L4 685 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Nsl1Q8K305 281 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rpa3Q9CQ71 121 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Zfyve19Q9DAZ9 389 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Gm5478D3Z6R0 159 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Klf6O08584 283 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Sema4dO09126 861 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Hmox2O70252 315 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Orc4O88708 433 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ankrd34bQ3UUF8 508 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Cnot7Q60809 285 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Exoc3l4Q6DIA2 721 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Bend6Q6PFX2 281 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Scfd2Q8BTY8 684 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 TbcelQ8C5W3 424 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Znf24Q91VN1 368 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 NcaldQ91X97 193 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Mtif2Q91YJ5 727 aaKnown RBP17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Trim33Q99PP7 1142 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Atp5f1Q9CQQ7 256 aaKnown RBP17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 PyglQ9ET01 850 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Tk2Q9R088 270 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Sucla2Q9Z2I9 463 aa17.2■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Epb41l4aP52963 686 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Arhgap45Q3TBD2 1116 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ccnt2Q7TQK0 723 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Fra10ac1Q8BP78 315 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Fam118bQ8C569 351 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Chid1Q922Q9 393 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Tmed11Q9D2R4 215 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rabl3Q9D4V7 236 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Sapcd2Q9D818 391 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Serpinb9bQ9DAV6 377 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Igsf1Q7TQA1 1317 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Lrrc7Q80TE7 1490 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 4930469K13RikA0A286YDB2 92 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Vps4bP46467 444 aaKnown RBP17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ubash3bQ8BGG7 638 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 SnrkQ8VDU5 748 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Q99LU8 229 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ttc30bQ9CY00 664 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 PlekQ9JHK5 350 aaKnown RBP17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Mageb2A2AHM0 380 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Adcy1O88444 1118 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 PlaaP27612 794 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Prim2P33610 505 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 NonoQ99K48 473 aaKnown RBP17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Mageb3Q9D2H4 330 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Echdc3Q9D7J9 300 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Abcc12Q80WJ6 1366 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Herc3A6H6S0 1050 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Grid1Q61627 1009 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Eps8l1Q8R5F8 716 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Med7Q9CZB6 233 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 TbcbQ9D1E6 244 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 PtprgQ05909 1442 aa17.19■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Btbd18A0A0A6YY25 723 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Vmn2r71L7N2D8 855 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Tsta3P23591 321 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Abce1P61222 599 aaKnown RBP17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rbm44Q3V089 1013 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Cep44Q5HZK1 386 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Scgb2b2Q6UGQ3 114 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Pgs1Q8BHF7 553 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Emilin1Q99K41 1017 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Lrrc34Q9DAM1 415 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rbck1Q9WUB0 508 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Pramef20B1ARV6 477 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Epb41P48193 858 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ces3aQ63880 571 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Tmem132dQ76HP3 1097 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ints2Q80UK8 1198 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ces3bQ8VCU1 571 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rprd1bQ9CSU0 326 aaKnown RBP17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Tmem68Q9D850 329 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Gadd45gQ9Z111 159 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rnaseh1O70338 285 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rbl2Q64700 1135 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ip6k2Q80V72 448 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Dnph1Q80VJ3 173 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Xpo7Q9EPK7 1087 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Hk2O08528 917 aaKnown RBP17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Rnf219Q8K2Y0 722 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Ndufb9Q9CQJ8 179 aa17.18■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Cdh19E9Q3A7 770 aa17.17■□□□□ 0.34
Col17a1-202ENSMUST00000086923 4930579F01RikE9Q3L6 325 aa17.17■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Gm5689F6Y2A6 97 aa17.17■□□□□ 0.34
Col17a1-202ENSMUST00000086923 Gm3248K7N721 186 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 30.3 ms