RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Tti1Q91V83 1085 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Xrn1P97789 1719 aaKnown RBP11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Hspa1bP17879 642 aaKnown RBP11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Atp9bP98195 1146 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm3414Q3TNU4 584 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 PighQ5M9N4 188 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Hsph1Q61699 858 aaKnown RBP11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Akap7Q7TN79 314 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Rasgrp4Q8BTM9 673 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Zhx2Q8C0C0 836 aaKnown RBP11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Racgap1Q9WVM1 628 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 SelenovD3YXG1 328 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Gm8897L7N294 181 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Unc5cO08747 931 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Grid1Q61627 1009 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Parp6Q6P6P7 630 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Usp1Q8BJQ2 784 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ccdc32Q8BS39 179 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 GancQ8BVW0 898 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Klhl11Q8CE33 709 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Stx5Q8K1E0 355 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Cap2Q9CYT6 476 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Ccdc81Q9D5W4 654 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 CitP49025 2055 aa11.21□□□□□ -0.61
Nipbl-201ENSMUST00000052965 Slc9a1Q61165 820 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Adck2Q6NSR3 617 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Scrn2Q8VCA8 425 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Retreg1dQ8VE91 480 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Eaf2Q91ZD6 262 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ugp2Q91ZJ5 508 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Dip2aQ8BWT5 1523 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm13084A2A8N0 494 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm340F6RGI3 1242 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm3424L7N298 263 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm8246M0QWX9 263 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ahcyl2Q68FL4 613 aaKnown RBP11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Znf12Q7TSI0 686 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Chit1Q9D7Q1 464 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 CtcflA2APF3 636 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Vmn2r23E9PXI5 849 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Srp72F8VQC1 671 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Nkx2-5P42582 318 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Fam92bQ3V2J0 292 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rapgefl1Q68EF8 662 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rbm15bQ6PHZ5 887 aaKnown RBP11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Zfp263Q8CF60 680 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Sgpp1Q9JI99 430 aa11.21□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Pabpc1lA2A5N3 607 aaKnown RBP11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Serpinb9O08797 374 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Myl2P51667 166 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 NficP70255 439 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rnf25Q9QZR0 456 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 PtsQ9R1Z7 144 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ubr1O70481 1757 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm21083A0A0G2JFD5 256 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Itih2Q61703 946 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Madcam1Q61826 405 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Hdac10Q6P3E7 666 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Znf618Q80YY7 953 aaKnown RBP11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Osbpl6Q8BXR9 959 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mccc1Q99MR8 717 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Borcs5Q9D920 195 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Xpo7Q9EPK7 1087 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Msx3P70354 204 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Acot6Q32Q92 419 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Sfi1Q3UZY0 1216 aaKnown RBP11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ndufaf2Q59J78 168 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Fam71bQ5STT6 665 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Klhl12Q8BZM0 568 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mill1Q8HWE7 395 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Cnga3Q9JJZ8 631 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Nphs1Q9QZS7 1256 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Atp5c1Q91VR2 298 aaKnown RBP11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mms19Q9D071 1031 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Trpc4apQ9JLV2 797 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Krt83E9Q1Y9 479 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Gm8922F6XVS9 199 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Vps33bP59016 617 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 CpdO89001 1377 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 MypnQ5DTJ9 1315 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Glt1d1A4FUP9 346 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Pole2O54956 527 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Krt6aP50446 553 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 UrosP51163 265 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 ThraP63058 492 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Mylk4Q5SUV5 386 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Nr1h2Q60644 446 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Rps6ka6Q7TPS0 764 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Moxd2Q7TT41 619 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Tlk1Q8C0V0 766 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Arel1Q8CHG5 823 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Abcg3Q99P81 650 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 ParvbQ9ES46 365 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Dkc1Q9ESX5 509 aaKnown RBP11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ptpn23Q6PB44 1692 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Il27raO70394 623 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Slc12a1P55014 1095 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Olfr297Q7TS07 310 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Ube2q1Q7TSS2 422 aa11.2□□□□□ -0.62
Nipbl-201ENSMUST00000052965 Actrt1Q9D9J3 376 aa11.2□□□□□ -0.62
Retrieved 100 of 22,080 RNA–protein pairs in 26 ms