RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Tmem145Q8C4U2 746 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Wdr27Q8C5V5 780 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Lars2Q8VDC0 902 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Foxp3Q99JB6 429 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Q99KU6 348 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Txndc12Q9CQU0 170 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Noa1Q9JJG9 693 aaKnown RBP11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fam205aA2APU8 1308 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zfp612A0A1D5RMC2 672 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 LdhbP16125 334 aaKnown RBP11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Arl4cP61208 192 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 FerP70451 823 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ptpn14Q62130 1189 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ptk6Q64434 451 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ccnt2Q7TQK0 723 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rpa3Q9CQ71 121 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm10250G3X9L6 160 aaKnown RBP11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tom1O88746 492 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tph1P17532 447 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Kmt5aQ2YDW7 349 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Amigo3Q8C2S7 508 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Q8CIL4 281 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tomm20lQ9D4V6 152 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Q9DA42 136 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Atp5hQ9DCX2 161 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 PapolbQ9WVP6 641 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ttc7bE9Q6P5 843 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Raph1F2Z3U3 1266 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Magea4F2Z493 315 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Msx2Q03358 267 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Wdr35Q8BND3 1181 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 PaoxQ8C0L6 504 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 AslQ91YI0 464 aa11.94□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Sipa1l2Q80TE4 1722 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Fcer2P20693 331 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rtkn2Q14B46 604 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cd37Q61470 281 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Dsg1aQ61495 1057 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Sec24bQ80ZX0 1251 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Dusp4Q8BFV3 398 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Scfd1Q8BRF7 639 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zhx2Q8C0C0 836 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ppm1fQ8CGA0 452 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Kat14Q8CID0 779 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Uroc1Q8VC12 676 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Txnrd3Q99MD6 652 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Sv2aQ9JIS5 742 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Lrrc63A6H694 637 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Lonrf1D3YY23 762 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Serpina3iD3Z450 408 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm5689F6Y2A6 97 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Tlk2O55047 718 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 GnazO70443 355 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 AfmO89020 608 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Caprin2Q05A80 1031 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pih1d3Q3KNI6 218 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 CrkQ64010 304 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nlrp4aQ8BU40 982 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Atp2a1Q8R429 994 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc14a1Q8VHL0 384 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 FtcdQ91XD4 541 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rpn1Q91YQ5 608 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Med15Q924H2 789 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 PawrQ925B0 333 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ggt7Q99JP7 662 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 NkapQ9D0F4 415 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 CsadQ9DBE0 493 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 CatspereP0DP43 985 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Gm8773Q3UQ24 132 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Scnn1aQ61180 699 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 D630039A03RikQ8K0M7 236 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pnpt1Q8K1R3 783 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rnf112Q96DY5 654 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Pacsin3Q99JB8 424 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ergic2Q9CR89 377 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Eif3dO70194 548 aaKnown RBP11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Klhl14Q69ZK5 630 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Orai2Q8BH10 250 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Frmd4aQ8BIE6 1020 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Strip1Q8C079 837 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nt5c3aQ9D020 331 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 XkQ9QXY7 446 aa11.93□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Vamp7P70280 220 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rmdn3Q3UJU9 470 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ece1Q4PZA2 769 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Rnf220Q6PDX6 566 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Nudcd3Q8R1N4 363 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Plcb4Q91UZ1 1175 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Afg3l1Q920A7 789 aaKnown RBP11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 DcpsQ9DAR7 338 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Psmg1Q9JK23 289 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Sucla2Q9Z2I9 463 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Zfp105G3X9I0 524 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Cdh16O88338 830 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 B3gnt3Q5JCS9 372 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 N4bp1Q6A037 893 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Otud6aQ6IE21 290 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Ttyh3Q6P5F7 524 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Leg1Q8C6C9 337 aa11.92□□□□□ -0.5
Topbp1-201ENSMUST00000035164 Slc39a3Q99K24 317 aa11.92□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 32.6 ms