RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gtf2ird1Q9JI57 1104 aaKnown RBP13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Serpinb6cW4VSP4 379 aa13.5□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Polr2aP08775 1970 aaKnown RBP13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm5926E9PWJ8 236 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rpl7aP12970 266 aaKnown RBP13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ces1cP23953 554 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Sh3bp2Q06649 559 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Nat8lQ3UGX3 299 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Vps41Q5KU39 853 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ppp1r1bQ60829 194 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zdhhc15Q8BGJ0 337 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dus1lQ8C2P3 475 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ap3m2Q8R2R9 418 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr390Q8VEZ7 311 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Castor1Q9CWQ8 331 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Snf8Q9CZ28 258 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fundc1Q9DB70 155 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lrrc63A6H694 637 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr456B2RT27 312 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Wdr95D3Z7A8 784 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 FlgP11088 336 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rnf10Q3UIW5 804 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tcf4Q60722 670 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ccdc117Q6PB51 277 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Daam2Q80U19 1115 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Impg2Q80XH2 1243 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Efcab14Q8BGQ6 484 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ppme1Q8BVQ5 386 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tmem145Q8C4U2 746 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tph2Q8CGV2 488 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Kdm1bQ8CIG3 826 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rpp40Q8R1F9 363 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Trpm8Q8R4D5 1104 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr458Q8VF80 313 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr1502Q8VG66 316 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Olfr457Q8VGP5 313 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 1700109H08RikQ9D9C0 210 aa13.49□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fndc3c1Q6DFV6 1356 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Efna5O08543 228 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tnni3P48787 211 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 PtpreP49446 699 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Foxp2P58463 714 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pou6f1Q07916 301 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 SpertQ32MG2 446 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Q3UJP5 209 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zfp957Q3UT76 567 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Nudt16Q6P3D0 195 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zbtb5Q7TQG0 670 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Cnksr2Q80YA9 1032 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ppm1kQ8BXN7 372 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Mamdc2Q8CG85 686 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Vps37cQ8R105 352 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Slc26a7Q8R2Z3 656 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tom1l1Q923U0 474 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Rnf135Q9CWS1 417 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 IkbipQ9DBZ1 373 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fut2Q9JL27 347 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Cpsf3Q9QXK7 684 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Orc1Q9Z1N2 840 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 SktA2AQ25 1946 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm27029A2A4P4 543 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dpy19l4A2AJQ3 722 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fam155bA2BDP1 471 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dpysl4O35098 572 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Impa1O55023 277 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Casp14O89094 257 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Prkg1P0C605 671 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Atf2P16951 487 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fam207aP58468 219 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Stmn4P63042 189 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ppm1jQ149T7 507 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Tex35Q14BK3 207 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Trappc3lQ4KL14 181 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Lsm8Q6ZWM4 96 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dzip3Q7TPV2 1204 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Moxd2Q7TT41 619 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Wdtc1Q80ZK9 677 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Sh2d5Q8JZW5 429 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 RnpepQ8VCT3 650 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Spns2Q91VM4 549 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Pcdha5Q91Y15 934 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ccdc124Q9D8X2 217 aaKnown RBP13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 DpysQ9EQF5 519 aa13.48□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Krt19P19001 403 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 VimP20152 466 aaKnown RBP13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Ppp4r3cQ3V0Y1 813 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Zdhhc18Q5Y5T2 380 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Myl6Q60605 151 aaKnown RBP13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Wnk4Q80UE6 1222 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Camta2Q80Y50 1208 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Als2cr12Q8BVM7 383 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fam118bQ8C569 351 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Fam133bQ9CVI2 245 aaKnown RBP13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Dusp21Q9D9D8 189 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Apol7bB1AQP7 369 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Gm382B1AXN3 1250 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 GclmO09172 274 aaKnown RBP13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 Hoxc6P10629 235 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 PrphP15331 475 aa13.47□□□□□ -0.25
Rnf4-201ENSMUST00000030992 PrkchP23298 683 aa13.47□□□□□ -0.25
Retrieved 100 of 22,080 RNA–protein pairs in 54.9 ms