RNA–Protein interactions for RNA: ENST00000641023.1

PHGDH-208, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,096 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-208ENST00000641023 ALDH1A1P00352 501 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 STAG3L1P0CL83 205 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 CXCL8P10145 99 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 AKR1A1P14550 325 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 ACO1P21399 889 aaKnown RBP18.53■□□□□ 0.56
PHGDH-208ENST00000641023 FCGRTP55899 365 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 ZNF572Q7Z3I7 529 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-208ENST00000641023 MSANTD4Q8NCY6 345 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 CPB2Q96IY4 423 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 KATNAL1Q9BW62 490 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 ANKZF1Q9H8Y5 726 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 PACSIN2Q9UNF0 486 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-208ENST00000641023 PCDHB4Q9Y5E5 795 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 A0A1B0GUA9 196 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 TSPAN1O60635 241 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 TCEAL1Q15170 157 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 TMEM270Q6UE05 265 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 ARHGEF26Q96DR7 871 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 GCOM2Q9BZD3 368 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-208ENST00000641023 FAM49AQ9H0Q0 323 aaPredicted RBP18.53■□□□□ 0.56
PHGDH-208ENST00000641023 PDCL3Q9H2J4 239 aa18.53■□□□□ 0.56
PHGDH-208ENST00000641023 ZSWIM8A7E2V4 1837 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 MBLAC1A4D2B0 266 aaPredicted RBP18.52■□□□□ 0.56
PHGDH-208ENST00000641023 CES2O00748 559 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 KIF4AO95239 1232 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 MYL3P08590 195 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 RHOXF2BP0C7M4 288 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 PSEN2P49810 448 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 DNA2P51530 1060 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 CLCN6P51797 869 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 HADHBP55084 474 aaKnown RBP18.52■□□□□ 0.56
PHGDH-208ENST00000641023 KIZQ2M2Z5 673 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 EFCAB13Q8IY85 973 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 ZIC5Q96T25 663 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 RHOXF2Q9BQY4 288 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 ASB7Q9H672 318 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 CTTNBP2NLQ9P2B4 639 aa18.52■□□□□ 0.56
PHGDH-208ENST00000641023 HAS3O00219 553 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 CYP2C9P11712 490 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 CTGFP29279 349 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 MYL6P60660 151 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 PCBP1Q15365 356 aaKnown RBP eCLIP18.51■□□□□ 0.552e-6■■■□□ 14.6
PHGDH-208ENST00000641023 ACAD10Q6JQN1 1059 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 CCDC70Q6NSX1 233 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 TMCO3Q6UWJ1 677 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 TMEM192Q8IY95 271 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 SPATA4Q8NEY3 305 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 GOLPH3Q9H4A6 298 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 AMFRQ9UKV5 643 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 CNTN6Q9UQ52 1028 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 GINS2Q9Y248 185 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 BUB1BO60566 1050 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-208ENST00000641023 PSMC4P43686 418 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 FSCN1Q16658 493 aaKnown RBP18.51■□□□□ 0.55
PHGDH-208ENST00000641023 SMYD5Q6GMV2 418 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 APBB1IPQ7Z5R6 666 aaPredicted RBP18.51■□□□□ 0.55
PHGDH-208ENST00000641023 PBKQ96KB5 322 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 ADAMTS10Q9H324 1103 aa18.51■□□□□ 0.55
PHGDH-208ENST00000641023 KCNK3O14649 394 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 DUSP11O75319 330 aaKnown RBP18.5■□□□□ 0.55
PHGDH-208ENST00000641023 GNA15P30679 374 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 IRX5P78411 483 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-208ENST00000641023 BEX3Q00994 111 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 BRD3Q15059 726 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 CLEC16AQ2KHT3 1053 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 ZNF699Q32M78 642 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 NT5DC3Q86UY8 548 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 NIF3L1Q9GZT8 377 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 GTF3C4Q9UKN8 822 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 FAM170AA1A519 330 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 CCDC151A5D8V7 595 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 LACTBL1A8MY62 500 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 RRP9O43818 475 aaKnown RBP18.5■□□□□ 0.55
PHGDH-208ENST00000641023 GPR32O75388 356 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 GNAT1P11488 350 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 TMEM62Q0P6H9 643 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 MFSD14CQ5VZR4 134 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 RBBP8NLQ8NC74 664 aaPredicted RBP18.5■□□□□ 0.55
PHGDH-208ENST00000641023 ACAP3Q96P50 834 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 SELENOOQ9BVL4 669 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 ABCB6Q9NP58 842 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 RAB21Q9UL25 225 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 COG5Q9UP83 839 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 STXBP5LQ9Y2K9 1186 aa18.5■□□□□ 0.55
PHGDH-208ENST00000641023 UMODL1Q5DID0 1318 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 KRT19P08727 400 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 UNGP13051 313 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-208ENST00000641023 ADAM17P78536 824 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 LACTBP83111 547 aaPredicted RBP18.49■□□□□ 0.55
PHGDH-208ENST00000641023 DCAF4L1Q3SXM0 396 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 TRIM72Q6ZMU5 477 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 MMGT1Q8N4V1 131 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 UBE2Q2Q8WVN8 375 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 HES6Q96HZ4 224 aa18.49■□□□□ 0.55
PHGDH-208ENST00000641023 KPNA6O60684 536 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 MCM3P25205 808 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 PURAQ00577 322 aaKnown RBP18.48■□□□□ 0.55
PHGDH-208ENST00000641023 C2orf54Q08AI8 447 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 SCARA3Q6AZY7 606 aa18.48■□□□□ 0.55
PHGDH-208ENST00000641023 JADE1Q6IE81 842 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms