RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 AMHP03971 560 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 LINC00271P0C7V0 271 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 MLH1P40692 756 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 MTIF2P46199 727 aaKnown RBP9.86□□□□□ -0.83
SCARB2-225ENST00000640900 TPM4P67936 248 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 SOX4Q06945 474 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-225ENST00000640900 GRIK3Q13003 919 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM132DQ14C87 1099 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 DUOXA2Q1HG44 320 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 EPC2Q52LR7 807 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 NOMO2Q5JPE7 1267 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 SMYD5Q6GMV2 418 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 GLB1LQ6UWU2 654 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 CD300LGQ6UXG3 332 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 OTOP2Q7RTS6 562 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 TRAPPC11Q7Z392 1133 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 LIMS2Q7Z4I7 341 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 FNBP1Q96RU3 617 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 LBHD1Q9BQE6 289 aaPredicted RBP9.86□□□□□ -0.83
SCARB2-225ENST00000640900 XYLT2Q9H1B5 865 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 SLC38A7Q9NVC3 462 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 TAB2Q9NYJ8 693 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 KLK14Q9P0G3 267 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 KANSL3Q9P2N6 904 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 PARP2Q9UGN5 583 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 UBQLN1Q9UMX0 589 aaKnown RBP9.86□□□□□ -0.83
SCARB2-225ENST00000640900 SIK3Q9Y2K2 1263 aa9.86□□□□□ -0.83
SCARB2-225ENST00000640900 A0A1W2PQC6 194 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 H0YGN5 161 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 PIRO00625 290 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 TEX33O43247 280 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 N4BP1O75113 896 aaKnown RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 THP07101 528 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 DLATP10515 647 aaKnown RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 C7P10643 843 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 FGFR1P11362 822 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 CDK11BP21127 795 aaKnown RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 GCLMP48507 274 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 AARSP49588 968 aaKnown RBP eCLIP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 MXI1P50539 228 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 SCNN1GP51170 649 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 KCNMA1Q12791 1236 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 C9orf50Q5SZB4 431 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 KRT39Q6A163 491 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 COLGALT2Q8IYK4 626 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 ANKRD20A12PQ8NF67 263 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 HELQQ8TDG4 1101 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 CACTINQ8WUQ7 758 aaKnown RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 SEMA4DQ92854 862 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 C18orf25Q96B23 403 aaPredicted RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 FAXDC2Q96IV6 333 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 FAM84AQ96KN4 292 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 SLC9A7Q96T83 725 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 APOL6Q9BWW8 343 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 MTMR12Q9C0I1 747 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 VPS16Q9H269 839 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 GRPEL1Q9HAV7 217 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 RYDENQ9NUL5 291 aaKnown RBP9.85□□□□□ -0.83
SCARB2-225ENST00000640900 TBC1D13Q9NVG8 400 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 DPP3Q9NY33 737 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 ITGA11Q9UKX5 1188 aa9.85□□□□□ -0.83
SCARB2-225ENST00000640900 GOLGA6L3A6NEY3 463 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM189-UBE2V1I3L0A0 370 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 NOL4O94818 638 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 DDHD2O94830 711 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 ASS1P00966 412 aaKnown RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 CST3P01034 146 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TNNI1P19237 187 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 PON1P27169 355 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 RPL9P32969 192 aaKnown RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 GATMP50440 423 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 UBASH3AP57075 661 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TUSC3Q13454 348 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 SHHQ15465 462 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 UPP1Q16831 310 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 GLRA4Q5JXX5 417 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 C9orf57Q5W0N0 161 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 LMBRD2Q68DH5 695 aaPredicted RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 ZNF280BQ86YH2 543 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 HERC6Q8IVU3 1022 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 CMTR2Q8IYT2 770 aaKnown RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TMEM130Q8N3G9 435 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 LRRC52Q8N7C0 313 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 EHBP1Q8NDI1 1231 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TAS1R2Q8TE23 839 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 MRFAP1L1Q96HT8 127 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 XPO4Q9C0E2 1151 aaKnown RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TTYH3Q9C0H2 523 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 CWH43Q9H720 699 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 SIX2Q9NPC8 291 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 PLCB1Q9NQ66 1216 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 IFNKQ9P0W0 207 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TUBGCP4Q9UGJ1 667 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 FBXL5Q9UKA1 691 aa9.84□□□□□ -0.83
SCARB2-225ENST00000640900 TDRD15B5MCY1 1934 aaKnown RBP9.84□□□□□ -0.83
SCARB2-225ENST00000640900 SCN1AP35498 2009 aa9.83□□□□□ -0.84
SCARB2-225ENST00000640900 ITIH6Q6UXX5 1313 aa9.83□□□□□ -0.84
SCARB2-225ENST00000640900 XPOTO43592 962 aaKnown RBP9.83□□□□□ -0.84
SCARB2-225ENST00000640900 ZC3H11AO75152 810 aaKnown RBP eCLIP9.83□□□□□ -0.84
SCARB2-225ENST00000640900 LRRN2O75325 713 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms