RNA–Protein interactions for RNA: ENST00000640568.1

TSPAN9-208, Transcript of tetraspanin 9, humanhuman

TSL 5

Gene TSPAN9, Length 1,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-208ENST00000640568 GOLGA2P5Q9HBQ8 144 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 DPP3Q9NY33 737 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 HCSTQ9UBK5 93 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 PTPRJQ12913 1337 aa23.32■■□□□ 1.32
TSPAN9-208ENST00000640568 CARNS1A5YM72 827 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 CA3P07451 260 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 PRKCSHP14314 528 aaPredicted RBP23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 DSC1Q08554 894 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 BIRC3Q13489 604 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 NAB2Q15742 525 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 TCP11X2Q5H9J9 407 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 CDKAL1Q5VV42 579 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 IRF2BP1Q8IU81 584 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 TRIM59Q8IWR1 403 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 COLGALT2Q8IYK4 626 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 OR5B17Q8NGF7 314 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 DNAJB4Q9UDY4 337 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 RWDD3Q9Y3V2 267 aa23.31■■□□□ 1.32
TSPAN9-208ENST00000640568 PHACTR2O75167 634 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 ALDH2P05091 517 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 KRT19P08727 400 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 PBX2P40425 430 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 ALDH7A1P49419 539 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 GUCY2FP51841 1108 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 CLDN10P78369 228 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 SMAD3P84022 425 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 SOX4Q06945 474 aaPredicted RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 RNF214Q8ND24 703 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 DDX27Q96GQ7 796 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 ZNF558Q96NG5 402 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 ITGA11Q9UKX5 1188 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 FAN1Q9Y2M0 1017 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 RANBP2P49792 3224 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 LINC01553A4QN01 128 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 PES1O00541 588 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 CLSTN1O94985 981 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 GTF2H1P32780 548 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 RPL9P32969 192 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 GCLMP48507 274 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 BCAR1P56945 870 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 MAN2A1Q16706 1144 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 SLC35C1Q96A29 364 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 NKX2-4Q9H2Z4 354 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 TMEM8AQ9HCN3 771 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 YBX2Q9Y2T7 364 aaKnown RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 PRG3Q9Y2Y8 225 aaPredicted RBP23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 PCDHB12Q9Y5F1 795 aa23.3■■□□□ 1.32
TSPAN9-208ENST00000640568 PODXLO00592 558 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 ITGB3P05106 788 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 LRPAP1P30533 357 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 MXI1P50539 228 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 CLCNKBP51801 687 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 TRPC3Q13507 836 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 KRT39Q6A163 491 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 KCNT2Q6UVM3 1135 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 TRAPPC11Q7Z392 1133 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 C1orf127Q8N9H9 656 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 ZNF516Q92618 1163 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 FAM84AQ96KN4 292 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 TUBGCP2Q9BSJ2 902 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 COLEC11Q9BWP8 271 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 CACNG4Q9UBN1 327 aa23.29■■□□□ 1.32
TSPAN9-208ENST00000640568 NRP1O14786 923 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 B4GALT3O60512 393 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 N4BP1O75113 896 aaKnown RBP23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 AFPP02771 609 aaKnown RBP23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 GALTP07902 379 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 DNAJB2P25686 324 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 POLR2BP30876 1174 aaKnown RBP23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 SLC11A1P49279 550 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 PPP3CAQ08209 521 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 KCNH2Q12809 1159 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 LRIT3Q3SXY7 679 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 C1orf220Q5T0J3 134 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 PPP2R2DQ66LE6 453 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 COLGALT1Q8NBJ5 622 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 CLP1Q92989 425 aaKnown RBP23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 ZNF560Q96MR9 790 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 SLC28A3Q9HAS3 691 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 SCN1AP35498 2009 aa23.28■■□□□ 1.32
TSPAN9-208ENST00000640568 NT5C1B-RDH14C9J2C7 533 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 C4BPAP04003 597 aaKnown RBP23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 ZNF18P17022 549 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 CTNNB1P35222 781 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 PBX3P40426 434 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 MCCD1P59942 119 aaPredicted RBP23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 RBP5P82980 135 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 CETN1Q12798 172 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 UPP1Q16831 310 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 ZACNQ401N2 412 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 TDRD10Q5VZ19 366 aaKnown RBP23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 C9orf57Q5W0N0 161 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 SV2AQ7L0J3 742 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 RABGGTAQ92696 567 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 SAMD11Q96NU1 681 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 PAAF1Q9BRP4 392 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 TAB2Q9NYJ8 693 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 AGAP1Q9UPQ3 857 aa23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 LAMA2P24043 3122 aaKnown RBP23.27■■□□□ 1.32
TSPAN9-208ENST00000640568 B3GAT3O94766 335 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms