RNA–Protein interactions for RNA: ENST00000640408.1

RTTN-218, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 5,589 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-218ENST00000640408 CATSPER3Q86XQ3 398 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PIGOQ8TEQ8 1089 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 RAB17Q9H0T7 212 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HIPK3Q9H422 1215 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 RPF1Q9H9Y2 349 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 DOCK1Q14185 1865 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PITPNM1O00562 1244 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 EIF3DO15371 548 aaKnown RBP eCLIP6.04□□□□□ -1.44
RTTN-218ENST00000640408 SORBS3O60504 671 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 E2F6O75461 281 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PRKCBP05771 671 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TMEM191BP0C7N4 346 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 SMIM10L2AP0DMW4 78 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 SMIM10L2BP0DMW5 78 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 BEX3Q00994 111 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TLE2Q04725 743 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PTPAQ15257 358 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HSDL1Q3SXM5 330 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 GJC2Q5T442 439 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 MAEAQ7L5Y9 396 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TBC1D1Q86TI0 1168 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 SPDYE1Q8NFV5 336 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 ANKRD27Q96NW4 1050 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PDGFCQ9NRA1 345 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 OGDHLQ9ULD0 1010 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 RWDD3Q9Y3V2 267 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HYOU1Q9Y4L1 999 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TRPM7Q96QT4 1865 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ARHGEF9O43307 516 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 S100BP04271 92 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 PAK1Q13153 545 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ABHD8Q96I13 439 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CELF4Q9BZC1 486 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 VIPAS39Q9H9C1 493 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 SETD4Q9NVD3 440 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 HDAC6Q9UBN7 1215 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ARMCX3Q9UH62 379 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 MAFBQ9Y5Q3 323 aaPredicted RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 TULP2O00295 520 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 NDC80O14777 642 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CLTBP09497 229 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 MRPS6P82932 125 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 KLC1Q07866 573 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 NT5DC4Q86YG4 428 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 FAM186BQ8IYM0 893 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 DNAJC5GQ8N7S2 189 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CFAP61Q8NHU2 1237 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CYP2W1Q8TAV3 490 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 ZNF333Q96JL9 665 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 CLIC6Q96NY7 704 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 TRIM9Q9C026 710 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 PAPOLBQ9NRJ5 636 aaKnown RBP6.04□□□□□ -1.44
RTTN-218ENST00000640408 OLFML3Q9NRN5 406 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 RHBDL2Q9NX52 303 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 SSX2IPQ9Y2D8 614 aa6.04□□□□□ -1.44
RTTN-218ENST00000640408 E9PMD0 336 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 ATP9AO75110 1047 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 ATG7O95352 703 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 GSTA2P09210 222 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 CCNE1P24864 410 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 BIRC3Q13489 604 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 NLRP14Q86W24 1093 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 CCDC60Q8IWA6 550 aaPredicted RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 KIAA2013Q8IYS2 634 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 RNF169Q8NCN4 708 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 BEST2Q8NFU1 509 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 TEKT4Q8WW24 435 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 THOC1Q96FV9 657 aaKnown RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 PAWRQ96IZ0 340 aaKnown RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 RNPEPQ9H4A4 650 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 TMEM134Q9H6X4 195 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 MSRAQ9UJ68 235 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 MYH8P13535 1937 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 FAM205CA6NFA0 338 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 AHCYL1O43865 530 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 TOM1L1O75674 476 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 AP1G2O75843 785 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 SLITRK3O94933 977 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 PURAQ00577 322 aaKnown RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 ITGB3BPQ13352 177 aaPredicted RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 SLC35G1Q2M3R5 365 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 ZNF568Q3ZCX4 644 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 KIAA1841Q6NSI8 718 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 METTL23Q86XA0 190 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 CSGALNACT2Q8N6G5 542 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 XXYLT1Q8NBI6 393 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 FAM81AQ8TBF8 368 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 COPS5Q92905 334 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 EPSTI1Q96J88 318 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 HAUS8Q9BT25 410 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 ST7Q9NRC1 585 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 TYW1Q9NV66 732 aaKnown RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 PDP2Q9P2J9 529 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 GTF2IRD1Q9UHL9 959 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 GNEQ9Y223 722 aaKnown RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 SYNRGQ9UMZ2 1314 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.03□□□□□ -1.44
RTTN-218ENST00000640408 ABHD14A-ACY1A0A1B0GW23 586 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 I3L4J1 428 aa6.03□□□□□ -1.44
RTTN-218ENST00000640408 M0R2N6 131 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms