RNA–Protein interactions for RNA: ENST00000640058.1

CCDC7-216, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 251 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-216ENST00000640058 RSPH3Q86UC2 560 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 SLC44A3Q8N4M1 653 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 DCBLD1Q8N8Z6 715 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 TBC1D15Q8TC07 691 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 CRAMP1Q96RY5 1269 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 TOR3AQ9H497 397 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 SYBUQ9NX95 663 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 SAP30BPQ9UHR5 308 aaKnown RBP6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA9Q9Y5G4 932 aaKnown RBP6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA8Q9Y5G5 932 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA7Q9Y5G6 932 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA6Q9Y5G7 932 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 PCDHGA3Q9Y5H0 932 aa6.48□□□□□ -1.37
CCDC7-216ENST00000640058 ERN1O75460 977 aaKnown RBP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 HKR1P10072 659 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 ALAS1P13196 640 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 AVPR1BP47901 424 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 CXADRP78310 365 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 AMPD3Q01432 767 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 FOXI1Q12951 378 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 PCBP2Q15366 365 aaKnown RBP eCLIP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 MIGA2Q7L4E1 593 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 GPR149Q86SP6 731 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 FITM2Q8N6M3 262 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 MARS2Q96GW9 593 aaKnown RBP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 C11orf54Q9H0W9 315 aaPredicted RBP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 TDP1Q9NUW8 608 aa6.47□□□□□ -1.37
CCDC7-216ENST00000640058 MTO1Q9Y2Z2 717 aaKnown RBP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 EPN1Q9Y6I3 576 aaPredicted RBP6.47□□□□□ -1.37
CCDC7-216ENST00000640058 KLHL33A6NCF5 533 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 PPFIA2O75334 1257 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 EGR2P11161 476 aaPredicted RBP6.46□□□□□ -1.38
CCDC7-216ENST00000640058 CKBP12277 381 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 SLC16A1P53985 500 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 SEC24CP53992 1094 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 KIF23Q02241 960 aaPredicted RBP6.46□□□□□ -1.38
CCDC7-216ENST00000640058 TAP1Q03518 808 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 SCAPQ12770 1279 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 IL10RAQ13651 578 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 C3orf36Q3SXR2 165 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 ABHD17BQ5VST6 288 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 FOXR2Q6PJQ5 311 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 OLFML1Q6UWY5 402 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 PRPF38AQ8NAV1 312 aaKnown RBP6.46□□□□□ -1.38
CCDC7-216ENST00000640058 SSH1Q8WYL5 1049 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 LINC00476Q8WZB0 136 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 TEKT5Q96M29 485 aa6.46□□□□□ -1.38
CCDC7-216ENST00000640058 GABRDO14764 452 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 KIAA0355O15063 1070 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 SBK3P0C264 359 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 CTXN1P60606 82 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 ARMC6Q6NXE6 501 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 PNMA8AQ86V59 439 aaPredicted RBP6.45□□□□□ -1.38
CCDC7-216ENST00000640058 KAT5Q92993 513 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 HDAC10Q969S8 669 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 NACC2Q96BF6 587 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 Q96MF0 132 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 SMAD5Q99717 465 aaKnown RBP6.45□□□□□ -1.38
CCDC7-216ENST00000640058 RIOX1Q9H6W3 641 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 HSFX1Q9UBD0 423 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 LIMCH1Q9UPQ0 1083 aa6.45□□□□□ -1.38
CCDC7-216ENST00000640058 CADPSQ9ULU8 1353 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 SHTN1A0MZ66 631 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 CCDC154A6NI56 674 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 FZD9O00144 591 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 HTRA2O43464 458 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-216ENST00000640058 FCER1AP12319 257 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 SLC6A4P31645 630 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 ADRA1BP35368 520 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 WASP42768 502 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 ATP2B3Q16720 1220 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.44□□□□□ -1.38
CCDC7-216ENST00000640058 COQ10AQ96MF6 247 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 SYNPO2LQ9H987 977 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 GALNT9Q9HCQ5 603 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 FAM30AQ9NZY2 134 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 KCNE5Q9UJ90 142 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 MRFAP1Q9Y605 127 aa6.44□□□□□ -1.38
CCDC7-216ENST00000640058 GRM6O15303 877 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 ZFPL1O95159 310 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 FDXRP22570 491 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 TGM1P22735 817 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 EDNRBP24530 442 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 ZNF280AP59817 542 aaPredicted RBP6.43□□□□□ -1.38
CCDC7-216ENST00000640058 CDC42EP1Q00587 391 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 SLFN5Q08AF3 891 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 CYP2A13Q16696 494 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 GEN1Q17RS7 908 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 UAP1L1Q3KQV9 507 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 IFI44Q8TCB0 444 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 NUP133Q8WUM0 1156 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 TLR10Q9BXR5 811 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 CASS4Q9NQ75 786 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 SERPINB13Q9UIV8 391 aa6.43□□□□□ -1.38
CCDC7-216ENST00000640058 ZAR1LA6NP61 321 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 HAUS5O94927 633 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 AGFG2O95081 481 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 TYRP1P17643 537 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 CXCR5P32302 372 aa6.42□□□□□ -1.38
CCDC7-216ENST00000640058 MPP3Q13368 585 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms