RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 MTA2O94776 668 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CAPN2P17655 700 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 PDE6CP51160 858 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CUL1Q13616 776 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 ZNF516Q92618 1163 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 RNPC3Q96LT9 517 aaKnown RBP16.18■□□□□ 0.18
TRIM3-215ENST00000639856 PPP1R16BQ96T49 567 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 RUFY1Q96T51 708 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CENPFP49454 3210 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 MIF4GDA9UHW6 222 aaKnown RBP16.18■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA8KD6RF30 607 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 H3BRB1 525 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 ZC3H11AO75152 810 aaKnown RBP eCLIP16.18■□□□□ 0.18
TRIM3-215ENST00000639856 PPFIA4O75335 1185 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 PRKCBP05771 671 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 EFNA5P52803 228 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CLDN10P78369 228 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CDR2Q01850 454 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 GCNT1Q02742 428 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CRHR2Q13324 411 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 SLFN12LQ6IEE8 588 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 C15orf39Q6ZRI6 1047 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 ENOSF1Q7L5Y1 443 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 MAATS1Q7Z4T9 603 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 ZBTB33Q86T24 672 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 EXOC8Q8IYI6 725 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 IQCKQ8N0W5 287 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 CCDC26Q8TAB7 109 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 TATDN2Q93075 761 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 NAP1L3Q99457 506 aaPredicted RBP16.18■□□□□ 0.18
TRIM3-215ENST00000639856 TUT1Q9H6E5 874 aaKnown RBP16.18■□□□□ 0.18
TRIM3-215ENST00000639856 SLC5A4Q9NY91 659 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 AMACRQ9UHK6 382 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 TLL2Q9Y6L7 1015 aa16.18■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA6CA6NDK9 693 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 KIAA0391O15091 583 aaKnown RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA6DP0CG33 693 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 CYP2B6P20813 491 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 GUCY2FP51841 1108 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 IRX5P78411 483 aaPredicted RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 TNFAIP2Q03169 654 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 PPFIA1Q13136 1202 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 GRM1Q13255 1194 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 PSMD6Q15008 389 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 CLUL1Q15846 466 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 ZNF484Q5JVG2 852 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 IQSEC1Q6DN90 963 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 ZBTB8OSQ8IWT0 167 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 PPP1R13LQ8WUF5 828 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 ALG3Q92685 438 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 ZIM3Q96PE6 472 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 JPH2Q9BR39 696 aaPredicted RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 MRPL4Q9BYD3 311 aaKnown RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 MINDY3Q9H8M7 445 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 GOLGA6AQ9NYA3 693 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 RBAKQ9NYW8 714 aaPredicted RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 ABT1Q9ULW3 272 aaKnown RBP16.17■□□□□ 0.18
TRIM3-215ENST00000639856 KAT6AQ92794 2004 aa16.17■□□□□ 0.18
TRIM3-215ENST00000639856 B4GALT5O43286 388 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 ECHS1P30084 290 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 ACTN2P35609 894 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 TNFSF9P41273 254 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 HLTFQ14527 1009 aaKnown RBP eCLIP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 MAPK6Q16659 721 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 ZPBP2Q6X784 338 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 DDX1Q92499 740 aaKnown RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 FAM81BQ96LP2 452 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 RPS6KC1Q96S38 1066 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 ACO2Q99798 780 aaKnown RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 PI4K2AQ9BTU6 479 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 ZSWIM8A7E2V4 1837 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 INO80B-WBP1J3KQ70 363 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 CLDN3O15551 220 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 FAM189A1O60320 539 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 CSDE1O75534 798 aaKnown RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 IQCF3P0C7M6 154 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 HOXD8P13378 290 aaPredicted RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 CTGFP29279 349 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 POU5F1Q01860 360 aaKnown RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 PPP2R5EQ16537 467 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 CFAP58Q5T655 872 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 OLFML2BQ68BL8 750 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 CDR2LQ86X02 465 aaPredicted RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 UBL4BQ8N7F7 174 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 LINC01465Q8N7H1 131 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 FAM76AQ8TAV0 307 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 DHX38Q92620 1227 aaKnown RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 USP6NLQ92738 828 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 INO80BQ9C086 356 aaPredicted RBP16.16■□□□□ 0.18
TRIM3-215ENST00000639856 C1orf112Q9NSG2 853 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 GTF3C4Q9UKN8 822 aa16.16■□□□□ 0.18
TRIM3-215ENST00000639856 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 ABLIM1O14639 778 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 DYNC1LI2O43237 492 aaPredicted RBP16.15■□□□□ 0.18
TRIM3-215ENST00000639856 CYP1A2P05177 515 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 HOXC6P09630 235 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 TNNI1P19237 187 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 PTENP60484 403 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 MBTD1Q05BQ5 628 aa16.15■□□□□ 0.18
TRIM3-215ENST00000639856 MESDQ14696 234 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms