RNA–Protein interactions for RNA: ENST00000639667.1

HNRNPU-220, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 2

Gene HNRNPU, Length 3,940 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-220ENST00000639667 NRDE2Q9H7Z3 1164 aa6.26□□□□□ -1.41
HNRNPU-220ENST00000639667 PLEKHA5Q9HAU0 1116 aa6.26□□□□□ -1.41
HNRNPU-220ENST00000639667 INTS13Q9NVM9 706 aa6.26□□□□□ -1.41
HNRNPU-220ENST00000639667 SPG21Q9NZD8 308 aa6.26□□□□□ -1.41
HNRNPU-220ENST00000639667 MRPL42Q9Y6G3 142 aaKnown RBP6.26□□□□□ -1.41
HNRNPU-220ENST00000639667 LRRIQ3A6PVS8 624 aaPredicted RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TRAPPC3O43617 180 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 HUS1O60921 280 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 DGKIO75912 1065 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 DDHD2O94830 711 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 HLA-DRAP01903 254 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CD58P19256 250 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 SLC11A1P49279 550 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 UBASH3AP57075 661 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 NCOA4Q13772 614 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PSMD6Q15008 389 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ARHGAP44Q17R89 818 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 WDR72Q3MJ13 1102 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ZNF667Q5HYK9 610 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 FAM171A1Q5VUB5 890 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 RBM43Q6ZSC3 357 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TRAPPC11Q7Z392 1133 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PPM1KQ8N3J5 372 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PARD3BQ8TEW8 1205 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CPLX3Q8WVH0 158 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ZNF560Q96MR9 790 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ZMAT2Q96NC0 199 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CASD1Q96PB1 797 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ALG13Q9NP73 1137 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TTC26A0AVF1 554 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 GOLGA6L3A6NEY3 463 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 NRP1O14786 923 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 SLC16A3O15427 465 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CAVIN2O95810 425 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ATP1A3P13637 1013 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 KRT5P13647 590 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 P4HA1P13674 534 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PROZP22891 400 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TAF6P49848 677 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CLCNKBP51801 687 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 FAM189BP81408 668 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 GPM6BQ13491 265 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 RAPGEF1Q13905 1077 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 KRT39Q6A163 491 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CRELD2Q6UXH1 353 aaPredicted RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CACNA2D4Q7Z3S7 1137 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 FRMD5Q7Z6J6 570 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 ZNF598Q86UK7 904 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 WDR49Q8IV35 697 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 OR6B3Q8NGW1 331 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 DDX27Q96GQ7 796 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 HPDLQ96IR7 371 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TGS1Q96RS0 853 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 C17orf80Q9BSJ5 609 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 MKNK1Q9BUB5 465 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PBX4Q9BYU1 374 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 SNX25Q9H3E2 840 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 IGFLR1Q9H665 355 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 RFXAPO00287 272 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 N4BP1O75113 896 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TRIM21P19474 475 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 COPB1P53618 953 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 MYL6P60660 151 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 MYBPC2Q14324 1141 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 MAN2A1Q16706 1144 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 TCP11X2Q5H9J9 407 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 GBP6Q6ZN66 633 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 EFCAB13Q8IY85 973 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CMTR2Q8IYT2 770 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 RIN2Q8WYP3 895 aaPredicted RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 PAAF1Q9BRP4 392 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 LSM14BQ9BX40 385 aaKnown RBP6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 IFNKQ9P0W0 207 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 STYXL1Q9Y6J8 313 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CENPFP49454 3210 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 HTTP42858 3142 aa6.25□□□□□ -1.41
HNRNPU-220ENST00000639667 CYB561D2O14569 222 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 PTGESO14684 152 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 URODP06132 367 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 FANCCQ00597 558 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 KRT31Q15323 416 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 SV2CQ496J9 727 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 CT47A1Q5JQC4 288 aaPredicted RBP6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 PLPP4Q5VZY2 271 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 SV2AQ7L0J3 742 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 RBM23Q86U06 439 aaKnown RBP6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 SLC9A9Q8IVB4 645 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 C12orf56Q8IXR9 622 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 KLHL23Q8NBE8 558 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 TMC2Q8TDI7 906 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 AUTS2Q8WXX7 1259 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 B3GALT6Q96L58 329 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 NT5C1BQ96P26 610 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 DMAC2Q9NW81 257 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 PCDHA11Q9Y5I1 949 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 FRMPD3Q5JV73 1810 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 MYH11P35749 1972 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 FAM170AA1A519 330 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 ABLIM1O14639 778 aa6.24□□□□□ -1.41
HNRNPU-220ENST00000639667 PPEF2O14830 753 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms