RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 ITGA8P53708 1063 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 RBM46Q8TBY0 533 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 ACAP3Q96P50 834 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 NUDCD1Q96RS6 583 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 RAB6BQ9NRW1 208 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 ZFP69BQ9UJL9 534 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 CPSF3Q9UKF6 684 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 USP20Q9Y2K6 914 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 CST8O60676 142 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 PDGFRBP09619 1106 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 LCP1P13796 627 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 RBBP5Q15291 538 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 RCOR2Q8IZ40 523 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 SKA2Q8WVK7 121 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 N4BP2L2Q92802 583 aaPredicted RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 PPWD1Q96BP3 646 aaKnown RBP15.24■□□□□ 0.03
SCARB2-216ENST00000639300 PSD3Q9NYI0 1048 aa15.24■□□□□ 0.03
SCARB2-216ENST00000639300 EPHB6O15197 1021 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 MAFGO15525 162 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 KLRC4O43908 158 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 LPXNO60711 386 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 BRD2P25440 801 aaKnown RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 SESN2P58004 480 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 MAPK7Q13164 816 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 LRIG3Q6UXM1 1119 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 KCTD17Q8N5Z5 321 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 SLC35C1Q96A29 364 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 IPO11Q9UI26 975 aaKnown RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 HACL1Q9UJ83 578 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 EIF4E1BA6NMX2 242 aaKnown RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 KIAA0391O15091 583 aaKnown RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 COILP38432 576 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 AP1B1Q10567 949 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 MXD4Q14582 209 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 SLC15A2Q16348 729 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 ZSWIM1Q9BR11 485 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 FAM49BQ9NUQ9 324 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 TMEM120BA0PK00 339 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 SLITRK3O94933 977 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 HSPA4LO95757 839 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 RBP3P10745 1247 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 FUT2Q10981 343 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 CYP4A22Q5TCH4 519 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 JADE1Q6IE81 842 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 TRMT10CQ7L0Y3 403 aaKnown RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 PID1Q7Z2X4 250 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 DEFB132Q7Z7B7 95 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 ATXN7L3BQ96GX2 97 aa15.23■□□□□ 0.03
SCARB2-216ENST00000639300 GCOM2Q9BZD3 368 aaPredicted RBP15.23■□□□□ 0.03
SCARB2-216ENST00000639300 ARFIP2P53365 341 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 KIF22Q14807 665 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 MTMR9Q96QG7 549 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 NOP53Q9NZM5 478 aaKnown RBP15.22■□□□□ 0.03
SCARB2-216ENST00000639300 KCNN4O15554 427 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 EXTL3O43909 919 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 RARBP10826 455 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 RRM1P23921 792 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CXCL9Q07325 125 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 SV2AQ7L0J3 742 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CERKQ8TCT0 537 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 EXT2Q93063 718 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 FGFR1OP2Q9NVK5 253 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 STAP1Q9ULZ2 295 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 PCDHAC2Q9Y5I4 1007 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CASQ2O14958 399 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-216ENST00000639300 HAUS5O94927 633 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CYP11B1P15538 503 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 Q4G0T1 1027 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 NUDCD3Q8IVD9 361 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 BBS5Q8N3I7 341 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 C1orf131Q8NDD1 294 aaKnown RBP15.22■□□□□ 0.03
SCARB2-216ENST00000639300 AGAP3Q96P47 875 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 RNF225M0QZC1 329 aaPredicted RBP15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CASP5P51878 434 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 CDR2Q01850 454 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 SLC12A1Q13621 1099 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 TMEM119Q4V9L6 283 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 MEI1Q5TIA1 1274 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 ACAD10Q6JQN1 1059 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 KIAA1841Q6NSI8 718 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 SPATA21Q7Z572 469 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 SLC47A2Q86VL8 602 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 TEX2Q8IWB9 1127 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 AGBL3Q8NEM8 1001 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 UBA3Q8TBC4 463 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 ATP6V1E2Q96A05 226 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 SEC16BQ96JE7 1060 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 OLFML3Q9NRN5 406 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 ZNF446Q9NWS9 450 aa15.22■□□□□ 0.03
SCARB2-216ENST00000639300 ORC1Q13415 861 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 RFX8Q6ZV50 586 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 MIPOL1Q8TD10 442 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 SYTL5Q8TDW5 730 aaPredicted RBP15.21■□□□□ 0.03
SCARB2-216ENST00000639300 NCAPGQ9BPX3 1015 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 PDCD2LQ9BRP1 358 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 TUBB6Q9BUF5 446 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 SMYD3Q9H7B4 428 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 ECT2Q9H8V3 914 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 SLC12A6Q9UHW9 1150 aa15.21■□□□□ 0.03
SCARB2-216ENST00000639300 PDE4DIPQ5VU43 2346 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms