RNA–Protein interactions for RNA: ENST00000639244.1

SCN3A-209, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5 BASIC

Gene SCN3A, Length 8,854 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-209ENST00000639244 IGHMBP2P38935 993 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 HNRNPMP52272 730 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 CDK18Q07002 472 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ITKQ08881 620 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PLEKHG4Q58EX7 1191 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 IDO2Q6ZQW0 420 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 RFX8Q6ZV50 586 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 NAT8LQ8N9F0 302 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PIK3C3Q8NEB9 887 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 FNDC8Q8TC99 324 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 SUCLG2Q96I99 432 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 SH2B1Q9NRF2 756 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 DBF4Q9UBU7 674 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 FAM50BQ9Y247 325 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 NUP155O75694 1391 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 TTC3P53804 2025 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 MAGEB3O15480 346 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 KRT8P05787 483 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PDHA2P29803 388 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 HTR2BP41595 481 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 XRCC4Q13426 336 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 GALNT3Q14435 633 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 XKR3Q5GH77 459 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 SH3D19Q5HYK7 790 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ZSCAN25Q6NSZ9 544 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PAPD4Q6PIY7 484 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 C4orf22Q6V702 233 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PRR23CQ6ZRP0 262 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 CPLX4Q7Z7G2 160 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 MRPL10Q7Z7H8 261 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 FAM26EQ8N5C1 309 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ICA1LQ8NDH6 482 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 SEC62Q99442 399 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ANKRD30AQ9BXX3 1397 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 TRPC5OSA6NMA1 111 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 DKC1O60832 514 aaKnown RBP eCLIP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 NOS1APO75052 506 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ASMTLO95671 621 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 WEE2P0C1S8 567 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 CTNNB1P35222 781 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 RXRGP48443 463 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 RNF4P78317 190 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 SSPNQ14714 243 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 TMEM214Q6NUQ4 689 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 LRRC34Q8IZ02 419 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 LILRB4Q8NHJ6 448 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 CCDC12Q8WUD4 166 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 NCOA5Q9HCD5 579 aaKnown RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 C20orf96Q9NUD7 363 aaPredicted RBP4.54□□□□□ -1.68
SCN3A-209ENST00000639244 HSPBP1Q9NZL4 362 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 PNMA3Q9UL41 463 aa4.54□□□□□ -1.68
SCN3A-209ENST00000639244 ST20-MTHFSA0A0A6YYL1 179 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 AKAP10O43572 662 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 GATCO43716 136 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 BRINP1O60477 761 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CHEK2O96017 543 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KRT1P04264 644 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RAPSNQ13702 412 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 LRIT3Q3SXY7 679 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PIK3AP1Q6ZUJ8 805 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FASTKD5Q7L8L6 764 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CAMK1DQ8IU85 385 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 C9orf16Q9BUW7 83 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SLC13A1Q9BZW2 595 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 AGPAT3Q9NRZ7 376 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TAS2R7Q9NYW3 318 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SELENONQ9NZV5 590 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 TBC1D14Q9P2M4 693 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DPPA5A6NC42 116 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PEX1O43933 1283 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CCNT1O60563 726 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ALBP02768 609 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 HLA-FP30511 346 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ADSLP30566 484 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 POLR2BP30876 1174 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 STAT1P42224 750 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PTPN9P43378 593 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CDKN1CP49918 316 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 COPB1P53618 953 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 AIF1P55008 147 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MLLT6P55198 1093 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 BEX3Q00994 111 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MAP2K5Q13163 448 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 MKRN4PQ13434 485 aaPredicted RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 EFTUD2Q15029 972 aaKnown RBP eCLIP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FUT11Q495W5 492 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 VARS2Q5ST30 1063 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ALKBH5Q6P6C2 394 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 ARFGAP2Q8N6H7 521 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DENND1AQ8TEH3 1009 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 HEXDCQ8WVB3 486 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 SMYD2Q9NRG4 433 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 RASSF1Q9NS23 344 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 DACT1Q9NYF0 836 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 FAM8A1Q9UBU6 413 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CENPBD1B2RD01 187 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 KIF28PB7ZC32 967 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 PDPK1O15530 556 aa4.53□□□□□ -1.68
SCN3A-209ENST00000639244 CNOT3O75175 753 aaKnown RBP4.53□□□□□ -1.68
SCN3A-209ENST00000639244 IDH1O75874 414 aaKnown RBP4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms