RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 SLC23A1Q9UHI7 598 aa4.92□□□□□ -1.62
CCDC7-211ENST00000638889 CCDC78A2IDD5 438 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 LRRC3CA6NJW4 275 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 PRSS23O95084 383 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 SLC6A2P23975 617 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 CCT2P78371 535 aaKnown RBP4.91□□□□□ -1.62
CCDC7-211ENST00000638889 MGAT2Q10469 447 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 KIAA0895LQ68EN5 471 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 SP5Q6BEB4 398 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-211ENST00000638889 FITM2Q8N6M3 262 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 STON2Q8WXE9 905 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 ADI1Q9BV57 179 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 FBXO34Q9NWN3 711 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 USP25Q9UHP3 1055 aa4.91□□□□□ -1.62
CCDC7-211ENST00000638889 AJAP1Q9UKB5 411 aaPredicted RBP4.91□□□□□ -1.62
CCDC7-211ENST00000638889 CCDC151A5D8V7 595 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 BRINP1O60477 761 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 FOLR3P41439 243 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 SLC5A3P53794 718 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 NOMO1Q15155 1222 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 MICALCLQ6ZW33 695 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 GRASPQ7Z6J2 395 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-211ENST00000638889 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.9□□□□□ -1.63
CCDC7-211ENST00000638889 TGFBRAP1Q8WUH2 860 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 KLK15Q9H2R5 256 aa4.9□□□□□ -1.63
CCDC7-211ENST00000638889 ARPP21Q9UBL0 812 aaPredicted RBP4.9□□□□□ -1.63
CCDC7-211ENST00000638889 FAM171A2A8MVW0 826 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 ORC4O43929 436 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 PEX1O43933 1283 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 GPR32O75388 356 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 ERBB2P04626 1255 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 GSPT1P15170 499 aaKnown RBP4.89□□□□□ -1.63
CCDC7-211ENST00000638889 FPR1P21462 350 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 STRN3Q13033 797 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 EPHA10Q5JZY3 1008 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 MARS2Q96GW9 593 aaKnown RBP4.89□□□□□ -1.63
CCDC7-211ENST00000638889 UROC1Q96N76 676 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 TIMP4Q99727 224 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 LDAHQ9H6V9 325 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 DMRT3Q9NQL9 472 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 ACTL7AQ9Y615 435 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 KAT6AQ92794 2004 aa4.89□□□□□ -1.63
CCDC7-211ENST00000638889 COL3A1P02461 1466 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-211ENST00000638889 TRGV11A0A075B6L2 103 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 WT1P19544 449 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-211ENST00000638889 PCSK1P29120 753 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 SLC6A9P48067 706 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 SCAND1P57086 179 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 SEPT2Q15019 361 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 TOR2AQ5JU69 321 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 PTF1AQ7RTS3 328 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 UBE3BQ7Z3V4 1068 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 CMIPQ8IY22 773 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 NLGN4YQ8NFZ3 816 aaPredicted RBP4.88□□□□□ -1.63
CCDC7-211ENST00000638889 SSH3Q8TE77 659 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 SMG7Q92540 1137 aaKnown RBP4.88□□□□□ -1.63
CCDC7-211ENST00000638889 MYOCQ99972 504 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 CAAP1Q9H8G2 361 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 MANSC1Q9H8J5 431 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 HSFX1Q9UBD0 423 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 ENTPD2Q9Y5L3 495 aa4.88□□□□□ -1.63
CCDC7-211ENST00000638889 DNAJC9-AS1A6NH13 148 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 SRGNP10124 158 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 ITGB6P18564 788 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 SOX5P35711 763 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 GYS2P54840 703 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 NOMO3P69849 1222 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 MTM1Q13496 603 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 ATP2B3Q16720 1220 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 GEN1Q17RS7 908 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 NBPF8Q3BBV2 869 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 NOMO2Q5JPE7 1267 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 DACT2Q5SW24 774 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 KIAA1614Q5VZ46 1190 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 SH2D3CQ8N5H7 860 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 Q8NA96 180 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 GSTO2Q9H4Y5 243 aa4.87□□□□□ -1.63
CCDC7-211ENST00000638889 A0A1W2PS29 197 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 CGB1A6NKQ9 187 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 KRTAP29-1A8MX34 341 aaPredicted RBP4.86□□□□□ -1.63
CCDC7-211ENST00000638889 YY2O15391 372 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 MPPED1O15442 326 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 PROM1O43490 865 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 ZFPL1O95159 310 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 GPR3P46089 330 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 MTNR1BP49286 362 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 SOX10P56693 466 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 ATP8B2P98198 1209 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 SRSF2Q01130 221 aaKnown RBP4.86□□□□□ -1.63
CCDC7-211ENST00000638889 SLFN5Q08AF3 891 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 SF3B3Q15393 1217 aaKnown RBP4.86□□□□□ -1.63
CCDC7-211ENST00000638889 AKNAD1Q5T1N1 836 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 ZNF788Q6ZQV5 615 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 STRA8Q7Z7C7 330 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 SCARB1Q8WTV0 552 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 C1QTNF7Q9BXJ2 289 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 ASB6Q9NWX5 421 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 NEU2Q9Y3R4 380 aa4.86□□□□□ -1.63
CCDC7-211ENST00000638889 CDHR4A6H8M9 788 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms