RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 DSG1Q02413 1049 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 BMT2Q1RMZ1 405 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 ARMCX5Q6P1M9 558 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 UROC1Q96N76 676 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 KLHL5Q96PQ7 755 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 MRPL17Q9NRX2 175 aaKnown RBP23.67■■□□□ 1.38
SCN1B-206ENST00000638536 HCFC2Q9Y5Z7 792 aa23.67■■□□□ 1.38
SCN1B-206ENST00000638536 TMEM189-UBE2V1I3L0A0 370 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 PPEF2O14830 753 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 NCK2O43639 380 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 GLUD2P49448 558 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 USP41Q3LFD5 358 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 FAM171A1Q5VUB5 890 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 PRSS55Q6UWB4 352 aaPredicted RBP23.66■■□□□ 1.38
SCN1B-206ENST00000638536 EFCAB13Q8IY85 973 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 TMEM87AQ8NBN3 555 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 NOC3LQ8WTT2 800 aaKnown RBP23.66■■□□□ 1.38
SCN1B-206ENST00000638536 AGPAT3Q9NRZ7 376 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 SF3B1O75533 1304 aaKnown RBP eCLIP23.66■■□□□ 1.388e-6■■■■■ 107
SCN1B-206ENST00000638536 RHOBTB3O94955 611 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 URODP06132 367 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 RPL17P18621 184 aaKnown RBP23.66■■□□□ 1.38
SCN1B-206ENST00000638536 NDUFV1P49821 464 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 SCARA3Q6AZY7 606 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 CEP57Q86XR8 500 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 FEZF2Q8TBJ5 459 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 MSLNLQ96KJ4 702 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 CDCA3Q99618 268 aaPredicted RBP23.66■■□□□ 1.38
SCN1B-206ENST00000638536 HSPBP1Q9NZL4 362 aa23.66■■□□□ 1.38
SCN1B-206ENST00000638536 UBE4BO95155 1302 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 TEX28O15482 410 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 EXTL3O43909 919 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 BMP1P13497 986 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 EPCAMP16422 314 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 PSMD2Q13200 908 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 KNOP1Q1ED39 458 aaKnown RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 LEXMQ3ZCV2 418 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 RIN2Q8WYP3 895 aaPredicted RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 DDX27Q96GQ7 796 aaKnown RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 IPO9Q96P70 1041 aaKnown RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 STK39Q9UEW8 545 aa23.65■■□□□ 1.38
SCN1B-206ENST00000638536 UBQLN1Q9UMX0 589 aaKnown RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 MTCL1Q9Y4B5 1905 aaKnown RBP23.65■■□□□ 1.38
SCN1B-206ENST00000638536 TULP1O00294 542 aaPredicted RBP23.64■■□□□ 1.38
SCN1B-206ENST00000638536 LRPAP1P30533 357 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 RPL9P32969 192 aaKnown RBP23.64■■□□□ 1.38
SCN1B-206ENST00000638536 BMS1Q14692 1282 aaKnown RBP23.64■■□□□ 1.38
SCN1B-206ENST00000638536 SPATA1Q5VX52 437 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 KIAA1841Q6NSI8 718 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 CBWD2Q8IUF1 395 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 GLYCTKQ8IVS8 523 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 BRSK2Q8IWQ3 736 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 CD302Q8IX05 232 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 GPD1LQ8N335 351 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 SLC22A17Q8WUG5 538 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 ASB7Q9H672 318 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 MAPK8IP1Q9UQF2 711 aa23.64■■□□□ 1.38
SCN1B-206ENST00000638536 LDHAP00338 332 aaKnown RBP23.63■■□□□ 1.37
SCN1B-206ENST00000638536 TKTP29401 623 aaKnown RBP23.63■■□□□ 1.37
SCN1B-206ENST00000638536 KANK3Q6NY19 840 aa23.63■■□□□ 1.37
SCN1B-206ENST00000638536 LNX1Q8TBB1 728 aaPredicted RBP23.63■■□□□ 1.37
SCN1B-206ENST00000638536 TTPALQ9BTX7 342 aa23.63■■□□□ 1.37
SCN1B-206ENST00000638536 KCTD10Q9H3F6 313 aa23.63■■□□□ 1.37
SCN1B-206ENST00000638536 RXFP1Q9HBX9 757 aa23.63■■□□□ 1.37
SCN1B-206ENST00000638536 BDP1A6H8Y1 2624 aa23.63■■□□□ 1.37
SCN1B-206ENST00000638536 CYP3A5P20815 502 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 FGFR3P22607 806 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 CYP2J2P51589 502 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 TMEM132DQ14C87 1099 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 TJAP1Q5JTD0 557 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 TMEM184AQ6ZMB5 413 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 SMYD4Q8IYR2 804 aaPredicted RBP23.62■■□□□ 1.37
SCN1B-206ENST00000638536 RDH13Q8NBN7 331 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 PDE11AQ9HCR9 933 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 RBAKQ9NYW8 714 aaPredicted RBP23.62■■□□□ 1.37
SCN1B-206ENST00000638536 DOCK6Q96HP0 2047 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 PRPF40AO75400 957 aaKnown RBP23.62■■□□□ 1.37
SCN1B-206ENST00000638536 IL9P15248 144 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 KLRC2P26717 231 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 CLCN4P51793 760 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 POU5F1Q01860 360 aaKnown RBP23.62■■□□□ 1.37
SCN1B-206ENST00000638536 KCNB1Q14721 858 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 SYCE2Q6PIF2 218 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 TIGD1Q96MW7 591 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 APOL5Q9BWW9 433 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 CDH22Q9UJ99 828 aa23.62■■□□□ 1.37
SCN1B-206ENST00000638536 GRXCR2A6NFK2 248 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 ADAM12O43184 909 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 PTPRJQ12913 1337 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 AAK1Q2M2I8 961 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 LMBRD2Q68DH5 695 aaPredicted RBP23.61■■□□□ 1.37
SCN1B-206ENST00000638536 RSPO2Q6UXX9 243 aaPredicted RBP23.61■■□□□ 1.37
SCN1B-206ENST00000638536 FBXL18Q96ME1 805 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 EMILIN2Q9BXX0 1053 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 DERAQ9Y315 318 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 C2CD2Q9Y426 696 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 PCDHA5Q9Y5H7 936 aa23.61■■□□□ 1.37
SCN1B-206ENST00000638536 SPTLC1O15269 473 aa23.6■■□□□ 1.37
SCN1B-206ENST00000638536 ELAVL2Q12926 359 aaKnown RBP23.6■■□□□ 1.37
SCN1B-206ENST00000638536 C9orf57Q5W0N0 161 aa23.6■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms