RNA–Protein interactions for RNA: ENST00000638448.1

GYPB-216, Transcript of glycophorin B (MNS blood group), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GYPB, Length 363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-216ENST00000638448 PIK3C3Q8NEB9 887 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 OR10H5Q8NGA6 315 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 BRIX1Q8TDN6 353 aaKnown RBP3.62□□□□□ -1.83
GYPB-216ENST00000638448 POF1BQ8WVV4 589 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 ARL8AQ96BM9 186 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 NMD3Q96D46 503 aaKnown RBP3.62□□□□□ -1.83
GYPB-216ENST00000638448 TMEM41AQ96HV5 264 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 UIMC1Q96RL1 719 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 TBCBQ99426 244 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 PDCD2LQ9BRP1 358 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 EIF2AQ9BY44 585 aaKnown RBP3.62□□□□□ -1.83
GYPB-216ENST00000638448 LDHAL6BQ9BYZ2 381 aaPredicted RBP3.62□□□□□ -1.83
GYPB-216ENST00000638448 TMEM168Q9H0V1 697 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 PPCSQ9HAB8 311 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 SARS2Q9NP81 518 aaKnown RBP3.62□□□□□ -1.83
GYPB-216ENST00000638448 SERHLQ9NQF3 203 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 TMEM140Q9NV12 185 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 GPRC5DQ9NZD1 345 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 FAM30AQ9NZY2 134 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 PPP4R1LQ9P1A2 415 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 FNIP2Q9P278 1114 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 DNAI1Q9UI46 699 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 ZDHHC8Q9ULC8 765 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 MED16Q9Y2X0 877 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 PCDHA13Q9Y5I0 950 aa3.62□□□□□ -1.83
GYPB-216ENST00000638448 CLCA1A8K7I4 914 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 C1QTNF3-AMACRE9PGA6 284 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 F5H423 210 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 H3BUI4 141 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ADAMTS3O15072 1205 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 TLR5O60602 858 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ALDH1A2O94788 518 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 AMY1AP04745 511 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 JUNP05412 331 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 THP07101 528 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 HSD3B1P14060 373 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 PRDX5P30044 214 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 KIR2DL3P43628 341 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ZXDAP98168 799 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ICAM4Q14773 271 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 CDSNQ15517 529 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 KHDC1Q4VXA5 237 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 TRMT10BQ6PF06 316 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 GADL1Q6ZQY3 521 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 PDZD4Q76G19 769 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 ZNF572Q7Z3I7 529 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 RSPH3Q86UC2 560 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 TRMT2AQ8IZ69 625 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 PQLC1Q8N2U9 271 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 LILRA3Q8N6C8 439 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 CHST13Q8NET6 341 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 DVL3Q92997 716 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 SLC7A6OSQ96CW6 309 aaPredicted RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 AJUBAQ96IF1 538 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 TMX3Q96JJ7 454 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 MRGPRX1Q96LB2 322 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 NAP1L4Q99733 375 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 CRB3Q9BUF7 120 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 BRIP1Q9BX63 1249 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 TRIM54Q9BYV2 358 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 CERS4Q9HA82 394 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ZNF287Q9HBT7 754 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 MOCS1Q9NZB8 636 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 GPRC5BQ9NZH0 403 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 LUZP4Q9P127 313 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 ABCF2Q9UG63 623 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 AFF4Q9UHB7 1163 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 OGDHLQ9ULD0 1010 aa3.61□□□□□ -1.83
GYPB-216ENST00000638448 MYBBP1AQ9BQG0 1328 aaKnown RBP3.61□□□□□ -1.83
GYPB-216ENST00000638448 KPNA5O15131 536 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 GPR42O15529 346 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 SH3BP5O60239 455 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 PIP5K1CO60331 668 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 EIF5BO60841 1220 aaKnown RBP3.6□□□□□ -1.83
GYPB-216ENST00000638448 ITGA10O75578 1167 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 VSIG10L2P0DP72 767 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 HNRNPLP14866 589 aaKnown RBP eCLIP3.6□□□□□ -1.831e-6■■■□□ 17.3
GYPB-216ENST00000638448 NPR1P16066 1061 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 DDCP20711 480 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 SMARCA1P28370 1054 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 SLC7A1P30825 629 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 IL6STP40189 918 aaPredicted RBP3.6□□□□□ -1.83
GYPB-216ENST00000638448 STT3AP46977 705 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 FLT3LGP49771 235 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 MEOX1P50221 254 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 EPHB4P54760 987 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 PER3P56645 1201 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 FMO1Q01740 532 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 ICA1Q05084 483 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 SNAPC2Q13487 334 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 NFYCQ13952 458 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 SURF1Q15526 300 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 FAM209BQ5JX69 171 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 OTUD7BQ6GQQ9 843 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 PLXDC1Q8IUK5 500 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 KBTBD2Q8IY47 623 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 MSL3Q8N5Y2 521 aaKnown RBP3.6□□□□□ -1.83
GYPB-216ENST00000638448 FANCBQ8NB91 859 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 PLA2G15Q8NCC3 412 aa3.6□□□□□ -1.83
GYPB-216ENST00000638448 VPS37AQ8NEZ2 397 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms