RNA–Protein interactions for RNA: ENST00000637832.1

CACNA1A-252, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 701 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-252ENST00000637832 RC3H2Q9HBD1 1191 aaKnown RBP13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 TMEM8AQ9HCN3 771 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 DPP3Q9NY33 737 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 TUBGCP4Q9UGJ1 667 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 PCDHA11Q9Y5I1 949 aa13.14□□□□□ -0.31
CACNA1A-252ENST00000637832 GBF1Q92538 1859 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 CASTOR2A6NHX0 329 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 P4HA2O15460 535 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 ITGB3P05106 788 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 ZNF18P17022 549 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PAX3P23760 479 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PPM1AP35813 382 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PNPLA4P41247 253 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PIK3CAP42336 1068 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 GCLMP48507 274 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 AFF1P51825 1210 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 DLG4P78352 724 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 DSC1Q08554 894 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 KCNH2Q12809 1159 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 MYO1EQ12965 1108 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 KRT31Q15323 416 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 ZBTB6Q15916 424 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 VWA3BQ502W6 1294 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 FKBP15Q5T1M5 1219 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 LMBRD2Q68DH5 695 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 SP7Q8TDD2 431 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 C18orf25Q96B23 403 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 POP1Q99575 1024 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 COLEC11Q9BWP8 271 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 MIOSQ9NXC5 875 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PLAGL2Q9UPG8 496 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 PCDHB12Q9Y5F1 795 aa13.13□□□□□ -0.31
CACNA1A-252ENST00000637832 CEP290O15078 2479 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 ALDH2P05091 517 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 LRPAP1P30533 357 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 OR1G1P47890 313 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 FMO5P49326 533 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 WNT7BP56706 349 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 MCCD1P59942 119 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 RBP5P82980 135 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 ZACNQ401N2 412 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 SV2AQ7L0J3 742 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 TRAPPC11Q7Z392 1133 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 ZNF280BQ86YH2 543 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 COLGALT2Q8IYK4 626 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 FBXL13Q8NEE6 735 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 OR5B17Q8NGF7 314 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 PLEKHO2Q8TD55 490 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 CXCL16Q9H2A7 254 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 NDST4Q9H3R1 872 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 TAB2Q9NYJ8 693 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 FAN1Q9Y2M0 1017 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 NUB1Q9Y5A7 615 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 MRPL42Q9Y6G3 142 aaKnown RBP13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 PTPRJQ12913 1337 aa13.12□□□□□ -0.31
CACNA1A-252ENST00000637832 KIAA1671Q9BY89 1806 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 NLRC5Q86WI3 1866 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 ARHGEF37A1IGU5 675 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 PODXLO00592 558 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 TRAPPC3O43617 180 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 B3GAT3O94766 335 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 DDHD2O94830 711 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 C4BPAP04003 597 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 ATP1A3P13637 1013 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 POLR2BP30876 1174 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 ATICP31939 592 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 RABGGTBP53611 331 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 COPB1P53618 953 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 BCAR1P56945 870 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 PPP3CAQ08209 521 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 NCOA4Q13772 614 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 NAB2Q15742 525 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 SV2CQ496J9 727 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 TDRD10Q5VZ19 366 aaKnown RBP13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 C9orf57Q5W0N0 161 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 DCLRE1AQ6PJP8 1040 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 LRRC52Q8N7C0 313 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 C1orf127Q8N9H9 656 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 TAF4BQ92750 862 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 SAMD11Q96NU1 681 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 VPS16Q9H269 839 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 HSD3B7Q9H2F3 369 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 PRO3102Q9H379 93 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 GOLGA2P5Q9HBQ8 144 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 STK39Q9UEW8 545 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 AGAP1Q9UPQ3 857 aa13.11□□□□□ -0.31
CACNA1A-252ENST00000637832 GTPBP10A4D1E9 387 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 LGALS16A8MUM7 142 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 GRXCR1A8MXD5 290 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 PMM2O15305 246 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 CBFA2T2O43439 604 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 CA3P07451 260 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 P4HA1P13674 534 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 CTNNB1P35222 781 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 TAF6P49848 677 aa13.1□□□□□ -0.31
CACNA1A-252ENST00000637832 CLCNKBP51801 687 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms