RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 KIAA0319Q5VV43 1072 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 PDXDC1Q6P996 788 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 NELFCDQ8IXH7 590 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 C12orf76Q8N812 135 aaPredicted RBP15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 BEST2Q8NFU1 509 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 CCDC47Q96A33 483 aaKnown RBP15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 SAAL1Q96ER3 474 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 CCDC34Q96HJ3 373 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 FBXL18Q96ME1 805 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 FAM213AQ9BRX8 229 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 PCIF1Q9H4Z3 704 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 MAN1C1Q9NR34 630 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 TSHZ2Q9NRE2 1034 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 DPP7Q9UHL4 492 aa15.66■□□□□ 0.1
CACNA1A-249ENST00000637777 PLXNA3P51805 1871 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 TTC26A0AVF1 554 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 TMEM189-UBE2V1I3L0A0 370 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 ACTN4O43707 911 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SPATA31D3P0C874 917 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SP100P23497 879 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 TKTP29401 623 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 CLCN4P51793 760 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 NDUFA8P51970 172 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SMAD2Q15796 467 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 JADE1Q6IE81 842 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 TMC5Q6UXY8 1006 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 TMEM184AQ6ZMB5 413 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SPATA31D4Q6ZUB0 917 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 CD302Q8IX05 232 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 RNF168Q8IYW5 571 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 C3orf58Q8NDZ4 430 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 PAGE5Q96GU1 130 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SFXN1Q9H9B4 322 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 SLC39A2Q9NP94 309 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 CHST7Q9NS84 486 aa15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 CPSF3Q9UKF6 684 aaKnown RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.65■□□□□ 0.1
CACNA1A-249ENST00000637777 VWA8A3KMH1 1905 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 EIF3DO15371 548 aaKnown RBP eCLIP15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 LDHAP00338 332 aaKnown RBP15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 NFICP08651 508 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 WEE2P0C1S8 567 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 GUCY2FP51841 1108 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 KCNC3Q14003 757 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 SYCE2Q6PIF2 218 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 ADHFE1Q8IWW8 467 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 GJD3Q8N144 294 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 GLIS3Q8NEA6 775 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 SLC22A17Q8WUG5 538 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 RPGRIP1Q96KN7 1286 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 RIPOR3Q96MK2 946 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 CBWD1Q9BRT8 395 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 RBAKQ9NYW8 714 aaPredicted RBP15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 PRKAG3Q9UGI9 489 aa15.64■□□□□ 0.09
CACNA1A-249ENST00000637777 ANK1P16157 1881 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 PVALEFA0A1B0GWK0 134 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 A0A1W2PQ27 194 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 A0A1W2PQ64 194 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 A0A1W2PQD8 194 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 MEFVO15553 781 aaPredicted RBP15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 FAM189A1O60320 539 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 LILRB3O75022 631 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 IL18RAPO95256 599 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 GARTP22102 1010 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 ARPP19P56211 112 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 TFAMQ00059 246 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 ITIH3Q06033 890 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 CBX2Q14781 532 aaPredicted RBP15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 LIN9Q5TKA1 542 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 CNNM4Q6P4Q7 775 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 DSTYKQ6XUX3 929 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 ANKS3Q6ZW76 656 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 HS2ST1Q7LGA3 356 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 PIK3R5Q8WYR1 880 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 STRA6Q9BX79 667 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 PIDD1Q9HB75 910 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 RXFP1Q9HBX9 757 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 FNIP2Q9P278 1114 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 R3HCC1Q9Y3T6 440 aaKnown RBP15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 STYXL1Q9Y6J8 313 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 UBE4BO95155 1302 aa15.63■□□□□ 0.09
CACNA1A-249ENST00000637777 TGM5O43548 720 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 EXTL3O43909 919 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 EFEMP2O95967 443 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 CYP3A5P20815 502 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 FGFR3P22607 806 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 IGFBP6P24592 240 aaPredicted RBP15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 ADSSP30520 456 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 MTHFRP42898 656 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 CYP2J2P51589 502 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 ZP2Q05996 745 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 ATAT1Q5SQI0 421 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 KANK3Q6NY19 840 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 USP37Q86T82 979 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 GPR65Q8IYL9 337 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 GPD1LQ8N335 351 aa15.62■□□□□ 0.09
CACNA1A-249ENST00000637777 TMEM130Q8N3G9 435 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms