RNA–Protein interactions for RNA: ENST00000636868.1

ATRX-222, Transcript of ATRX, chromatin remodeler, human

TSL 5

Gene ATRX, Length 100 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATRX-222	ENST00000636868	GLB1L2	Q8IW92	636 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	REPS2	Q8NFH8	660 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	TOR1AIP2	Q8NFQ8	470 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	SNX33	Q8WV41	574 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	LPIN2	Q92539	896 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	ANO3	Q9BYT9	981 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	SIK3	Q9Y2K2	1263 aa		3.36	□□□□□ -1.87
ATRX-222	ENST00000636868	SMIM35	A0A1B0GVV1	85 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	TISP43	B9A030	160 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	GPR15	P49685	360 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	PTPRR	Q15256	657 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	CCDC178	Q5BJE1	867 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	C19orf54	Q5BKX5	351 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	RRP12	Q5JTH9	1297 aa	Known RBP	3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	TMPRSS12	Q86WS5	348 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	CAMKK1	Q8N5S9	505 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	NANOGP1	Q8N7R0	232 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	HIPK2	Q9H2X6	1198 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	TOMM22	Q9NS69	142 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	TRNAU1AP	Q9NX07	287 aa	Known RBP	3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	HSFX1	Q9UBD0	423 aa		3.35	□□□□□ -1.87
ATRX-222	ENST00000636868	FAM90A8P	A6NJQ4	464 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	GAST	P01350	101 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	FAM90A13P	P0C7W8	464 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	FAM90A24P	P0C7X0	464 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	DRD4	P21917	467 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	PTPN7	P35236	360 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	PPARA	Q07869	468 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868		Q4G0T1	1027 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	FOXP4	Q8IVH2	680 aa	Predicted RBP	3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	SLC30A5	Q8TAD4	765 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	ZMAT4	Q9H898	229 aa		3.34	□□□□□ -1.87
ATRX-222	ENST00000636868	PRSS47	A8MTI9	375 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	WNT10B	O00744	389 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	OAZ2	O95190	189 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	CRHR1	P34998	444 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	MEF2A	Q02078	507 aa	Predicted RBP	3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	MTERF2	Q49AM1	385 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	DDX53	Q86TM3	631 aa	Known RBP	3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	MYCBPAP	Q8TBZ2	947 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	ZNF480	Q8WV37	535 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	NR4A3	Q92570	626 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	TMEM125	Q96AQ2	219 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	MARS2	Q96GW9	593 aa	Known RBP	3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	SAMD15	Q9P1V8	674 aa		3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	EVL	Q9UI08	416 aa	Predicted RBP	3.33	□□□□□ -1.88
ATRX-222	ENST00000636868	FAM83G	A6ND36	823 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	NTN3	O00634	580 aa	Predicted RBP	3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	RANGAP1	P46060	587 aa	Predicted RBP	3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	TRIP6	Q15654	476 aa	Known RBP	3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	UBAP2	Q5T6F2	1119 aa	Known RBP	3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	PRAMEF17	Q5VTA0	474 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	CREB3L3	Q68CJ9	461 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	ZNF572	Q7Z3I7	529 aa	Predicted RBP	3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	ZZZ3	Q8IYH5	903 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	VCPIP1	Q96JH7	1222 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	PGBD1	Q96JS3	809 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	MRI1	Q9BV20	369 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	SPO11	Q9Y5K1	396 aa		3.32	□□□□□ -1.88
ATRX-222	ENST00000636868	ATRNL1	Q5VV63	1379 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	CD8B2	A6NJW9	211 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	SMIM22	K7EJ46	135 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	SMAD6	O43541	496 aa	Known RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	URI1	O94763	535 aa	Predicted RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	POMC	P01189	267 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	CTSS	P25774	331 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	ZCCHC8	Q6NZY4	707 aa	Known RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	C9orf47	Q6ZRZ4	202 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	ESPNL	Q6ZVH7	1005 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	TRMT2A	Q8IZ69	625 aa	Known RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	DCP1B	Q8IZD4	617 aa	Known RBP	3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	LILRB2	Q8N423	598 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868		Q8NA96	180 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	INTS13	Q9NVM9	706 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	SH3BP4	Q9P0V3	963 aa		3.31	□□□□□ -1.88
ATRX-222	ENST00000636868	CYP2D7	A0A087X1C5	515 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	VWC2L	B2RUY7	222 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	PDPK1	O15530	556 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	TTLL1	O95922	423 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	ALOX15	P16050	662 aa	Predicted RBP	3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	CCT8	P50990	548 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	RASA3	Q14644	834 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	UBXN2B	Q14CS0	331 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	DAZAP2	Q15038	168 aa	Predicted RBP	3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	GFI1B	Q5VTD9	330 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	MRPL10	Q7Z7H8	261 aa	Known RBP	3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	PRSS3P2	Q8NHM4	247 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	CABP5	Q9NP86	173 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	PDGFC	Q9NRA1	345 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	FBXO34	Q9NWN3	711 aa		3.3	□□□□□ -1.88
ATRX-222	ENST00000636868	WDR27	A2RRH5	827 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	EME2	A4GXA9	379 aa	Predicted RBP	3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	EBLN1	P0CF75	366 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	RAP2A	P10114	183 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	GATA3	P23771	443 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	CD40	P25942	277 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	NOMO3	P69849	1222 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	NOMO1	Q15155	1222 aa		3.29	□□□□□ -1.88
ATRX-222	ENST00000636868	NOMO2	Q5JPE7	1267 aa		3.29	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms