RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 WDR49Q8IV35 697 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 VSTM4Q8IW00 320 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 CPLX3Q8WVH0 158 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 APBB2Q92870 758 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 PPP1R10Q96QC0 940 aaKnown RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 TMEM8AQ9HCN3 771 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 FAM207AQ9NSI2 230 aaPredicted RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 DPP3Q9NY33 737 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 VWA8A3KMH1 1905 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 CASTOR2A6NHX0 329 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 ZBBXA8MT70 800 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 KRT19P08727 400 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 PNMA6AP0CW24 399 aaPredicted RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 POLR2BP30876 1174 aaKnown RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 PBX3P40426 434 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 FILIP1LQ4L180 1135 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 KRT39Q6A163 491 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 PHLDB3Q6NSJ2 640 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 MRFAP1L1Q96HT8 127 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 INTS2Q9H0H0 1204 aaKnown RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 ASB7Q9H672 318 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 APOBEC3GQ9HC16 384 aaKnown RBP11.51□□□□□ -0.57
CLN5-213ENST00000636681 TMEM161AQ9NX61 479 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 DNAJB4Q9UDY4 337 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 PCDHB7Q9Y5E2 793 aa11.51□□□□□ -0.57
CLN5-213ENST00000636681 REV3LO60673 3130 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 TRANK1O15050 2925 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 PARNO95453 639 aaKnown RBP11.5□□□□□ -0.57
CLN5-213ENST00000636681 CALCAP01258 141 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 KCNE1P15382 129 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 PIK3CAP42336 1068 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 MAGEA10P43363 369 aaPredicted RBP11.5□□□□□ -0.57
CLN5-213ENST00000636681 NCOA4Q13772 614 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 DUOXA2Q1HG44 320 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 TRIM65Q6PJ69 517 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 RRAGAQ7L523 313 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 APBB1IPQ7Z5R6 666 aaPredicted RBP11.5□□□□□ -0.57
CLN5-213ENST00000636681 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 C3orf58Q8NDZ4 430 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 PCMTD1Q96MG8 357 aaPredicted RBP11.5□□□□□ -0.57
CLN5-213ENST00000636681 CASD1Q96PB1 797 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 ERGIC2Q96RQ1 377 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 ARID3AQ99856 593 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 GANQ9H2C0 597 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 C1orf112Q9NSG2 853 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 POLIQ9UNA4 740 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 AGAP1Q9UPQ3 857 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 GIT1Q9Y2X7 761 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 NUB1Q9Y5A7 615 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 FHOD1Q9Y613 1164 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 NLRC5Q86WI3 1866 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 CDH23Q9H251 3354 aa11.5□□□□□ -0.57
CLN5-213ENST00000636681 TBKBP1A7MCY6 615 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 SPTLC1O15269 473 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 CBFA2T2O43439 604 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 PHACTR2O75167 634 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 EOMESO95936 686 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 FGBP02675 491 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 GYPCP04921 128 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 ITGB1P05556 798 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 FXR1P51114 621 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLN5-213ENST00000636681 CLCNKBP51801 687 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 PPIGQ13427 754 aaKnown RBP eCLIP11.49□□□□□ -0.57
CLN5-213ENST00000636681 KYAT1Q16773 422 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 EXOC3L4Q17RC7 722 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 FKBP15Q5T1M5 1219 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 FAM109BQ6ICB4 259 aaPredicted RBP11.49□□□□□ -0.57
CLN5-213ENST00000636681 GBP6Q6ZN66 633 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
CLN5-213ENST00000636681 FBXL13Q8NEE6 735 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 HASPINQ8TF76 798 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 PGBD4Q96DM1 585 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 ANKRD36BP1Q96IX9 119 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 RPS6KC1Q96S38 1066 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 XYLT2Q9H1B5 865 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 NLRC4Q9NPP4 1024 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TBC1D13Q9NVG8 400 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 RAB20Q9NX57 234 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 LRFN2Q9ULH4 789 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 COQ4Q9Y3A0 265 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TSC2P49815 1807 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 I3L4J1 428 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TNNC2P02585 160 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 THP07101 528 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TPM2P07951 284 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 RAP1GAPP47736 663 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 CDR1P51861 262 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 SURF1Q15526 300 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 NOMO2Q5JPE7 1267 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 E4F1Q66K89 784 aaPredicted RBP11.49□□□□□ -0.57
CLN5-213ENST00000636681 SCARA5Q6ZMJ2 495 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 SPRED2Q7Z698 418 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 DRC7Q8IY82 874 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TOP1MTQ969P6 601 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 TTYH3Q9C0H2 523 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 C2CD2Q9Y426 696 aa11.49□□□□□ -0.57
CLN5-213ENST00000636681 ABHD14A-ACY1A0A1B0GW23 586 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 GRXCR1A8MXD5 290 aa11.48□□□□□ -0.57
CLN5-213ENST00000636681 NT5C1B-RDH14C9J2C7 533 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms