RNA–Protein interactions for RNA: ENST00000636114.1

CD46-219, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 2,098 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-219ENST00000636114 SLC6A3Q01959 620 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 PKP1Q13835 747 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 STAT4Q14765 748 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 PUM3Q15397 648 aaKnown RBP2.99□□□□□ -1.93
CD46-219ENST00000636114 TERF2Q15554 542 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 ATP2B3Q16720 1220 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 ME3Q16798 604 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 WDR72Q3MJ13 1102 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 CCDC152Q4G0S7 254 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 METTL24Q5JXM2 366 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 CCDC183Q5T5S1 534 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 KANK2Q63ZY3 851 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 SLFN12LQ6IEE8 588 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 TIGD7Q6NT04 549 aaPredicted RBP2.99□□□□□ -1.93
CD46-219ENST00000636114 CPLX2Q6PUV4 134 aaKnown RBP2.99□□□□□ -1.93
CD46-219ENST00000636114 LCNL1Q6ZST4 164 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 CCDC83Q8IWF9 413 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 ZNF34Q8IZ26 560 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 TMTC2Q8N394 836 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 ZNF610Q8N9Z0 462 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 NCOA7Q8NI08 942 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 TUBGCP5Q96RT8 1024 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 MPHOSPH8Q99549 860 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 SPATA25Q9BR10 227 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 TMEM168Q9H0V1 697 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 RIPOR2Q9Y4F9 1068 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 SPATA31A1Q5TZJ5 1347 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 RTL9Q8NET4 1388 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 ZNF609O15014 1411 aa2.99□□□□□ -1.93
CD46-219ENST00000636114 PLCH1Q4KWH8 1693 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 H3BQV1 296 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 CTAGE5O15320 804 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 PFKFB2O60825 505 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 CUTAO60888 179 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 CDKL5O76039 1030 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 TPM3P06753 285 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 PCP11498 1178 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 KRTAP5-9P26371 169 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 ID4P47928 161 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 PIP4K2AP48426 406 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 GJA9P57773 515 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 SESN3P58005 492 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 EXOSC10Q01780 885 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 MAP3K12Q12852 859 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 TOB2Q14106 344 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 PPP2R5BQ15173 497 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 LRRC24Q50LG9 513 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 BROXQ5VW32 411 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 PRAMEF9Q5VWM5 478 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 MCTP2Q6DN12 878 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 NAA16Q6N069 864 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 Q6ZUG5 572 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 NOL8Q76FK4 1167 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 RALYLQ86SE5 291 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 ZNF589Q86UQ0 364 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 FAM124AQ86V42 546 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 TXNDC5Q8NBS9 432 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 ATL2Q8NHH9 583 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 GPT2Q8TD30 523 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 GTF3C6Q969F1 213 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 FAM89AQ96GI7 184 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 MAML3Q96JK9 1138 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 LCORQ96JN0 433 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 ZNF396Q96N95 335 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 UTP14AQ9BVJ6 771 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 NACAP1Q9BZK3 213 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 NYXQ9GZU5 481 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 TSPY26PQ9H489 355 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 BARX1Q9HBU1 254 aaPredicted RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 GNL3LQ9NVN8 582 aaKnown RBP2.98□□□□□ -1.93
CD46-219ENST00000636114 MSRAQ9UJ68 235 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 TPCN1Q9ULQ1 816 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 MTMR6Q9Y217 621 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 ATP8A1Q9Y2Q0 1164 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 ZMYM6O95789 1325 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 GLI3P10071 1580 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 NUP188Q5SRE5 1749 aa2.98□□□□□ -1.93
CD46-219ENST00000636114 SPATA31A5Q5VU36 1347 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 SPATA31A7Q8IWB4 1347 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP2.97□□□□□ -1.93
CD46-219ENST00000636114 VPS37CA5D8V6 355 aaPredicted RBP2.97□□□□□ -1.93
CD46-219ENST00000636114 E7EWF7 191 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 GPR39O43194 453 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 CCDC192P0DO97 292 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 BMP7P18075 431 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 POLD1P28340 1107 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 ADD2P35612 726 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 TMPRSS15P98073 1019 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 NFATC3Q12968 1075 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 MYBPC3Q14896 1274 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 ALX1Q15699 326 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 CAVIN4Q5BKX8 364 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 RNF219Q5W0B1 726 aaPredicted RBP2.97□□□□□ -1.93
CD46-219ENST00000636114 OTOP2Q7RTS6 562 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 RASSF3Q86WH2 238 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 SPATS2Q86XZ4 545 aaKnown RBP2.97□□□□□ -1.93
CD46-219ENST00000636114 REXO1L1PQ8IX06 675 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 KLHL36Q8N4N3 616 aa2.97□□□□□ -1.93
CD46-219ENST00000636114 MARCH10Q8NA82 808 aaPredicted RBP2.97□□□□□ -1.93
CD46-219ENST00000636114 NUDT10Q8NFP7 164 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms