RNA–Protein interactions for RNA: ENST00000635853.1

SPTAN1-228, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 5

Gene SPTAN1, Length 5,870 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-228ENST00000635853 HOXC10Q9NYD6 342 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 FBXO2Q9UK22 296 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 SMIM31A0A1B0GVY4 71 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 DPYDQ12882 1025 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 UBE2SQ16763 222 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 CEP55Q53EZ4 464 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 FSCBQ5H9T9 825 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ALKBH5Q6P6C2 394 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ZBTB8BQ8NAP8 495 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 TTC8Q8TAM2 541 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 RASGRP4Q8TDF6 673 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 TBCKQ8TEA7 893 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 DACH2Q96NX9 599 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 OSBPL8Q9BZF1 889 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 KRT87PA6NCN2 255 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 EIF4A1P60842 406 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 TTLL4Q14679 1199 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 NAB2Q15742 525 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 LONRF1Q17RB8 773 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 LRRC24Q50LG9 513 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 KLHL25Q9H0H3 589 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 RANBP17Q9H2T7 1088 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 NGRNQ9NPE2 291 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 MRPL40Q9NQ50 206 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ATAD3AQ9NVI7 634 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 FBXO40Q9UH90 709 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ADAMTS1Q9UHI8 967 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 AFF2P51816 1311 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 PDS5AQ29RF7 1337 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 SSU72P8A0A1W2PR75 194 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 TRPC1P48995 793 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 MTA1Q13330 715 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ALCAMQ13740 583 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 GJC2Q5T442 439 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 BTNL9Q6UXG8 535 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 DNAJC17Q9NVM6 304 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 SEL1LQ9UBV2 794 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 RPL26L1Q9UNX3 145 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 APOBEC2Q9Y235 224 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 SYCE1LA8MT33 242 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ENO1P06733 434 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 MXI1P50539 228 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 LRRC36Q1X8D7 754 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 ADCK2Q7Z695 626 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 RHOT2Q8IXI1 618 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 GPBP1L1Q9HC44 474 aaPredicted RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 DDX28Q9NUL7 540 aaKnown RBP10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 SERPINB13Q9UIV8 391 aa10.35□□□□□ -0.75
SPTAN1-228ENST00000635853 IFNAR1P17181 557 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 MAP4P27816 1152 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ARPC4P59998 168 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 KCNJ2P63252 427 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 CDK17Q00537 523 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 BTKQ06187 659 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ZNF568Q3ZCX4 644 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 BTBD8Q5XKL5 378 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 EIF1ADQ8N9N8 165 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 OR9Q1Q8NGQ5 310 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 MASTLQ96GX5 879 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 AIFM3Q96NN9 605 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 TRIM51Q9BSJ1 452 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 SPON2Q9BUD6 331 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ASPSCR1Q9BZE9 553 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PABPC3Q9H361 631 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 C6orf203Q9P0P8 240 aaPredicted RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PCDHB8Q9UN66 801 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ZC3H4Q9UPT8 1303 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 GLI1P08151 1106 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 LLGL1Q15334 1064 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 RNF220Q5VTB9 566 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PCNX4Q63HM2 1172 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PKN3Q6P5Z2 889 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 POTEEQ6S8J3 1075 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 WRNIP1Q96S55 665 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 WWP1Q9H0M0 922 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 TIMMDC1Q9NPL8 285 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 DDX18Q9NVP1 670 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PHF2O75151 1096 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 HSPA1AP0DMV8 641 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 HSPA1BP0DMV9 641 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 SERPINB10P48595 397 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 FNTAP49354 379 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 NME3Q13232 169 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 TRIP10Q15642 601 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ZNF699Q32M78 642 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 P3H1Q32P28 736 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ARL6IP4Q66PJ3 421 aaKnown RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 TRPV6Q9H1D0 765 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 PHTF1Q9UMS5 762 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ZHX2Q9Y6X8 837 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 UBA6A0AVT1 1052 aaPredicted RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ZNF197O14709 1029 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 FKBP6O75344 327 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 USP17L8P0C7I0 530 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 KRT72Q14CN4 511 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 NKX1-1Q15270 411 aaPredicted RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 RIBC1Q8N443 379 aaPredicted RBP10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 TRIM62Q9BVG3 475 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 MAN1C1Q9NR34 630 aa10.34□□□□□ -0.75
SPTAN1-228ENST00000635853 ASNSD1Q9NWL6 643 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms