RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 BRWD1Q9NSI6 2320 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 ZNF233A6NK53 670 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PODXLO00592 558 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 GTF2F1P35269 517 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 GUCY2FP51841 1108 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 DSG1Q02413 1049 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 BMS1Q14692 1282 aaKnown RBP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 TMEM132DQ14C87 1099 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PTPN14Q15678 1187 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 CTC1Q2NKJ3 1217 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 COBLL1Q53SF7 1204 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 RBM23Q86U06 439 aaKnown RBP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 NT5DC4Q86YG4 428 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 SLC9A9Q8IVB4 645 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 GPR65Q8IYL9 337 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 SMYD4Q8IYR2 804 aaPredicted RBP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 TMEM130Q8N3G9 435 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 HASPINQ8TF76 798 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 AUTS2Q8WXX7 1259 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PPP2R3CQ969Q6 453 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 GTPBP4Q9BZE4 634 aaKnown RBP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 TLE6Q9H808 572 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PRDM6Q9NQX0 595 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 TRAF3IP3Q9Y228 551 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 EYSQ5T1H1 3165 aa10.56□□□□□ -0.72
LINC00339-210ENST00000635675 SF3B1O75533 1304 aaKnown RBP eCLIP10.56□□□□□ -0.72
LINC00339-210ENST00000635675 PER2O15055 1255 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 XPOTO43592 962 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 NCK2O43639 380 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 PRCPP42785 496 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 NRIP1P48552 1158 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 GLUD2P49448 558 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 CYP2J2P51589 502 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 ELAVL2Q12926 359 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 ADAM15Q13444 863 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 MYBPC2Q14324 1141 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 SKIV2LQ15477 1246 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 SNRNP35Q16560 246 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 CAMK4Q16566 473 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 DUSP6Q16828 381 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 USP41Q3LFD5 358 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 ZCWPW2Q504Y3 356 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 FAM171A1Q5VUB5 890 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 EFCAB13Q8IY85 973 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 EFHBQ8N7U6 833 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 RDH13Q8NBN7 331 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 BEST2Q8NFU1 509 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 NOC3LQ8WTT2 800 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 HLA-CQ95604 372 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 PABPC5Q96DU9 382 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 B3GALT6Q96L58 329 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 MFSD14AQ96MC6 490 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 CDCA3Q99618 268 aaPredicted RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 IGFLR1Q9H665 355 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 PDE11AQ9HCR9 933 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 MRPL17Q9NRX2 175 aaKnown RBP10.55□□□□□ -0.72
LINC00339-210ENST00000635675 MAN1B1Q9UKM7 699 aa10.55□□□□□ -0.72
LINC00339-210ENST00000635675 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-210ENST00000635675 ANO9A1A5B4 782 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 PIRO00625 290 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 C2CD2LO14523 706 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 LINC01565O15544 149 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 TRAPPC3O43617 180 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 CALUO43852 315 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-210ENST00000635675 EXOC3O60645 756 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 CLASP2O75122 1294 aaKnown RBP10.54□□□□□ -0.72
LINC00339-210ENST00000635675 NR3C1P04150 777 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 URODP06132 367 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 BMP6P22004 513 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 FGFR3P22607 806 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 MCM4P33991 863 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 LTBRP36941 435 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 BRCC3P46736 316 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 KCNC3Q14003 757 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 MORC3Q14149 939 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 SURF1Q15526 300 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 NFIL3Q16649 462 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 RTP2Q5QGT7 225 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 C9orf57Q5W0N0 161 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 ISM2Q6H9L7 571 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 KIAA1841Q6NSI8 718 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 KLHL5Q96PQ7 755 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 TTPALQ9BTX7 342 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 GZF1Q9H116 711 aaPredicted RBP10.54□□□□□ -0.72
LINC00339-210ENST00000635675 RXFP1Q9HBX9 757 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 DPP3Q9NY33 737 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 KIAA1468Q9P260 1216 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 COG5Q9UP83 839 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 SSX2IPQ9Y2D8 614 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 VWA8A3KMH1 1905 aa10.54□□□□□ -0.72
LINC00339-210ENST00000635675 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 GOLGA6L22H0YM25 854 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 I3L4J1 428 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 PPEF2O14830 753 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CNPP09543 421 aaKnown RBP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 AARSP49588 968 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00339-210ENST00000635675 CASP4P49662 377 aa10.53□□□□□ -0.72
LINC00339-210ENST00000635675 LILRA4P59901 499 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms