RNA–Protein interactions for RNA: ENST00000635251.1

PSPC1-207, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 2,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-207ENST00000635251 SAMD3Q8N6K7 520 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 CCDC63Q8NA47 563 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 ATP6V0A1Q93050 837 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 IFT74Q96LB3 600 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 TRAIPQ9BWF2 469 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 YY1AP1Q9H869 796 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 MLXIPLQ9NP71 852 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 A1CFQ9NQ94 594 aaKnown RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 AVENQ9NQS1 362 aaPredicted RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 CTNNAL1Q9UBT7 734 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 SEPT9Q9UHD8 586 aaPredicted RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 MYPNQ86TC9 1320 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 TCP11X1B4DZS4 312 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 GSTA1P08263 222 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 POTEJP0CG39 1038 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 RALAP11233 206 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 CREB1P16220 341 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 IBSPP21815 317 aaPredicted RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 CCND2P30279 289 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 CENPCQ03188 943 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 BRDTQ58F21 947 aaPredicted RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 ZFYVE27Q5T4F4 411 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 SWSAP1Q6NVH7 229 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 GSTA5Q7RTV2 222 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 PASD1Q8IV76 773 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 RDM1Q8NG50 284 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 GDAP1Q8TB36 358 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 FAM118BQ9BPY3 351 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 C11orf70Q9BRQ4 267 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 HERPUD2Q9BSE4 406 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 FGFR1OP2Q9NVK5 253 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 TBK1Q9UHD2 729 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 TPX2Q9ULW0 747 aaKnown RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 USTQ9Y2C2 406 aa11.4□□□□□ -0.58
PSPC1-207ENST00000635251 R3HDM2Q9Y2K5 976 aaKnown RBP11.4□□□□□ -0.58
PSPC1-207ENST00000635251 ADGRA3Q8IWK6 1321 aa11.4□□□□□ -0.59
PSPC1-207ENST00000635251 EP400Q96L91 3159 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 GSTTP1A0A1W2PQM5 241 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 TP73O15350 636 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 SORBS3O60504 671 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 DKC1O60832 514 aaKnown RBP eCLIP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 PSAPP07602 524 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 IVDP26440 423 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 SSTR3P32745 418 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 MAP2K2P36507 400 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 NBPF9Q3BBW0 867 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ZNF568Q3ZCX4 644 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 NUGGCQ68CJ6 796 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 RHOT1Q8IXI2 618 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 BBOF1Q8ND07 529 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 MCPH1Q8NEM0 835 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ZNF516Q92618 1163 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 DDX27Q96GQ7 796 aaKnown RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 PWWP2AQ96N64 755 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 NTPCRQ9BSD7 190 aaKnown RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 POLR3FQ9H1D9 316 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 NINJ2Q9NZG7 142 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 SLC12A4Q9UP95 1085 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 USP15Q9Y4E8 981 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 FOXO6A8MYZ6 492 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 SNX3O60493 162 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 DGAT1O75907 488 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 PROSCO94903 275 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 HLA-DRAP01903 254 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 BRAFP15056 766 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 STX2P32856 288 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ELF3P78545 371 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 BAATQ14032 418 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 IZUMO3Q5VZ72 239 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 SPOPLQ6IQ16 392 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 VSTM1Q6UX27 236 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 GPATCH11Q8N954 259 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 CCDC77Q9BR77 488 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 KIAA1683Q9H0B3 1180 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 RPAP3Q9H6T3 665 aaPredicted RBP11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ATP6V0A4Q9HBG4 840 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ABCF3Q9NUQ8 709 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 ADAM22Q9P0K1 906 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 GGT7Q9UJ14 662 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 PCDHB4Q9Y5E5 795 aa11.39□□□□□ -0.59
PSPC1-207ENST00000635251 H0YCG3 227 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 PSTPIP1O43586 416 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 EXTL3O43909 919 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 ZNF862O60290 1169 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 SUN1O94901 812 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 NR3C2P08235 984 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 CD58P19256 250 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 CETN2P41208 172 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 ADCY1Q08828 1119 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 STRN3Q13033 797 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 MTMR2Q13614 643 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 TBC1D1Q86TI0 1168 aaPredicted RBP11.38□□□□□ -0.59
PSPC1-207ENST00000635251 TTLL6Q8N841 843 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 CCDC89Q8N998 374 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 TCP11Q8WWU5 503 aa11.38□□□□□ -0.59
PSPC1-207ENST00000635251 NCAPGQ9BPX3 1015 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms