RNA–Protein interactions for RNA: ENST00000629151.2

PTPN7-219, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 5 BASIC

Gene PTPN7, Length 437 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-219ENST00000629151 STAU1O95793 577 aaKnown RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 AFPP02771 609 aaKnown RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 C4BPAP04003 597 aaKnown RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 NFICP08651 508 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 FAM163BP0C2L3 166 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 KRT17Q04695 432 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 ELAVL2Q12926 359 aaKnown RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 MYO1EQ12965 1108 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 NAB2Q15742 525 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 SGSM1Q2NKQ1 1148 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 VWA3BQ502W6 1294 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 DCAF17Q5H9S7 520 aaPredicted RBP12.46□□□□□ -0.41
PTPN7-219ENST00000629151 GLRA4Q5JXX5 417 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 FKBP15Q5T1M5 1219 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 C15orf39Q6ZRI6 1047 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 SV2AQ7L0J3 742 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 TRAPPC11Q7Z392 1133 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 LUZP1Q86V48 1076 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 ZNF560Q96MR9 790 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 IMPG2Q9BZV3 1241 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 CWH43Q9H720 699 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 NRDE2Q9H7Z3 1164 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 SLC28A3Q9HAS3 691 aa12.46□□□□□ -0.41
PTPN7-219ENST00000629151 TMEM265A0A087WTH1 108 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 ANO9A1A5B4 782 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 PIRO00625 290 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 ZC3H11AO75152 810 aaKnown RBP eCLIP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 TADA2AO75478 443 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 B3GAT3O94766 335 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 DDHD2O94830 711 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 TPM3P06753 285 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 GALTP07902 379 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 P4HA1P13674 534 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 BMPR1AP36894 532 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 OR1G1P47890 313 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 GCLMP48507 274 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 FMO5P49326 533 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 MXI1P50539 228 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 AFF1P51825 1210 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 BCAR1P56945 870 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 DLG4P78352 724 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 BIRC3Q13489 604 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 BMS1Q14692 1282 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 UPP1Q16831 310 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 UVSSAQ2YD98 709 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 PAN2Q504Q3 1202 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 C9orf57Q5W0N0 161 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 KCNT2Q6UVM3 1135 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 ZNF280BQ86YH2 543 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 EFCAB13Q8IY85 973 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 FBXL13Q8NEE6 735 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 OR5B17Q8NGF7 314 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 FAM81BQ96LP2 452 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 POP1Q99575 1024 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 MTMR12Q9C0I1 747 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 NDST4Q9H3R1 872 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 SPG21Q9NZD8 308 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 PUF60Q9UHX1 559 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 PLAGL2Q9UPG8 496 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 COQ4Q9Y3A0 265 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 NUB1Q9Y5A7 615 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 MRPL42Q9Y6G3 142 aaKnown RBP12.45□□□□□ -0.42
PTPN7-219ENST00000629151 TTC3P53804 2025 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 COL4A6Q14031 1691 aa12.45□□□□□ -0.42
PTPN7-219ENST00000629151 SCN5AQ14524 2016 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 LINC01553A4QN01 128 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 C5orf67F2Z3F1 127 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 PODXLO00592 558 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 NRP1O14786 923 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 SERPINC1P01008 464 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 TAF6P49848 677 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 GATMP50440 423 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 WNT7BP56706 349 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 UBE3AQ05086 875 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 PPP3CAQ08209 521 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 NCOA4Q13772 614 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 KRT31Q15323 416 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 SV2CQ496J9 727 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 WDR44Q5JSH3 913 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 C1orf220Q5T0J3 134 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 TMCO2Q7Z6W1 182 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-219ENST00000629151 GPR65Q8IYL9 337 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 PLEKHO2Q8TD55 490 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 ZNF516Q92618 1163 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 C18orf25Q96B23 403 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-219ENST00000629151 TMEM169Q96HH4 297 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 TGS1Q96RS0 853 aaKnown RBP12.44□□□□□ -0.42
PTPN7-219ENST00000629151 PBX4Q9BYU1 374 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 VRTNQ9H8Y1 702 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 RAB20Q9NX57 234 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 PCDH10Q9P2E7 1040 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 AGAP1Q9UPQ3 857 aa12.44□□□□□ -0.42
PTPN7-219ENST00000629151 COLQQ9Y215 455 aaPredicted RBP12.44□□□□□ -0.42
PTPN7-219ENST00000629151 TET1Q8NFU7 2136 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 CASTOR2A6NHX0 329 aa12.43□□□□□ -0.42
PTPN7-219ENST00000629151 GRXCR1A8MXD5 290 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms