RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 HERC2P3Q9BVR0 1158 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 NUP62CLQ9H1M0 184 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 NSUN3Q9H649 340 aaKnown RBP8.72□□□□□ -1.01
CHD2-213ENST00000628118 DMAC2Q9NW81 257 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 MARCH5Q9NX47 278 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 RBAKQ9NYW8 714 aaPredicted RBP8.72□□□□□ -1.01
CHD2-213ENST00000628118 DNAJB4Q9UDY4 337 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 MAN1B1Q9UKM7 699 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 ADAM28Q9UKQ2 775 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 FRMD4BQ9Y2L6 1034 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 IRAK3Q9Y616 596 aa8.72□□□□□ -1.01
CHD2-213ENST00000628118 SF3B1O75533 1304 aaKnown RBP eCLIP8.72□□□□□ -1.017e-7■■■■□ 20.8
CHD2-213ENST00000628118 BICDL2A1A5D9 508 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 CASTOR2A6NHX0 329 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 RBAK-RBAKDNI3L0D1 243 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 PODXLO00592 558 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SNPHO15079 494 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 CLIC2O15247 247 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 TADA2AO75478 443 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 B3GAT3O94766 335 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 EFEMP2O95967 443 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 NR3C1P04150 777 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 PNPLA4P41247 253 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 PRCPP42785 496 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 MORC3Q14149 939 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SMC1AQ14683 1233 aaKnown RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 PSMD6Q15008 389 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SNRNP35Q16560 246 aaKnown RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 USP41Q3LFD5 358 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SEZ6Q53EL9 994 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 CT47A1Q5JQC4 288 aaPredicted RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 GLRA4Q5JXX5 417 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 ZBTB41Q5SVQ8 909 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 JADE1Q6IE81 842 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 CENPPQ6IPU0 288 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 FUT10Q6P4F1 479 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SPRED2Q7Z698 418 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 WDR49Q8IV35 697 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 ADSSL1Q8N142 457 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 VPS52Q8N1B4 723 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 SAAL1Q96ER3 474 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 ZMAT2Q96NC0 199 aaKnown RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 FNBP1Q96RU3 617 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 ZBP1Q9H171 429 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 PCIF1Q9H4Z3 704 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 ALG13Q9NP73 1137 aaKnown RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.71□□□□□ -1.02
CHD2-213ENST00000628118 HCSTQ9UBK5 93 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 DACH1Q9UI36 760 aa8.71□□□□□ -1.02
CHD2-213ENST00000628118 PRG3Q9Y2Y8 225 aaPredicted RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 COL4A4P53420 1690 aaPredicted RBP8.71□□□□□ -1.02
CHD2-213ENST00000628118 PRRC2BQ5JSZ5 2229 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 ANK1P16157 1881 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 NT5C1B-RDH14C9J2C7 533 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 RFXAPO00287 272 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 SYN3O14994 580 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CETN3O15182 167 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MEFVO15553 781 aaPredicted RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 B4GALT3O60512 393 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 FGFR1OPO95684 399 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 URODP06132 367 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 NR2F2P24468 414 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CCNE1P24864 410 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MCM4P33991 863 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 PSMC2P35998 433 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 PBX3P40426 434 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CYP2J2P51589 502 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CLCNKBP51801 687 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 FKBP3Q00688 224 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 DSG1Q02413 1049 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CYP24A1Q07973 514 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 ADAM9Q13443 819 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 CAMK1Q14012 370 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 DSG2Q14126 1118 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 DUOXA2Q1HG44 320 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 ZCWPW2Q504Y3 356 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 INTS8Q75QN2 995 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 TMC7Q7Z402 723 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 PPFIBP1Q86W92 1011 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MRPL43Q8N983 215 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 MLKLQ8NB16 471 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MICAL1Q8TDZ2 1067 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 SYAP1Q96A49 352 aaPredicted RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 ANKRD36BP1Q96IX9 119 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MFSD14AQ96MC6 490 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 ZNF560Q96MR9 790 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 TCF25Q9BQ70 676 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 EMILIN2Q9BXX0 1053 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 OXCT2Q9BYC2 517 aaPredicted RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 IKZF4Q9H2S9 585 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 ENTPD7Q9NQZ7 604 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 MRPL17Q9NRX2 175 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 CHST7Q9NS84 486 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 ITGA11Q9UKX5 1188 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 R3HCC1Q9Y3T6 440 aaKnown RBP8.7□□□□□ -1.02
CHD2-213ENST00000628118 NUB1Q9Y5A7 615 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 PLXNA4Q9HCM2 1894 aa8.7□□□□□ -1.02
CHD2-213ENST00000628118 LAMA2P24043 3122 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms