RNA–Protein interactions for RNA: ENST00000627185.1

CHD2-209, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 3

Gene CHD2, Length 533 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-209ENST00000627185 P3H4Q92791 437 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 PGM2Q96G03 612 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 RNPC3Q96LT9 517 aaKnown RBP9.11□□□□□ -0.95
CHD2-209ENST00000627185 CCDC43Q96MW1 224 aaKnown RBP9.11□□□□□ -0.95
CHD2-209ENST00000627185 ZSWIM1Q9BR11 485 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 TSEN34Q9BSV6 310 aaKnown RBP9.11□□□□□ -0.95
CHD2-209ENST00000627185 LRRC19Q9H756 370 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 CNOT10Q9H9A5 744 aaKnown RBP9.11□□□□□ -0.95
CHD2-209ENST00000627185 ZDHHC18Q9NUE0 388 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 EHD2Q9NZN4 543 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 FAM153AQ9UHL3 310 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 SLC12A6Q9UHW9 1150 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 RRP15Q9Y3B9 282 aaKnown RBP9.11□□□□□ -0.95
CHD2-209ENST00000627185 PCDHA3Q9Y5H8 950 aa9.11□□□□□ -0.95
CHD2-209ENST00000627185 A0A087WUV0 522 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 C5orf60A6NFR6 353 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 GOLGA6L10A6NI86 522 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 A6NJY4 79 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 TMCO5BA8MYB1 307 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 SPATA31C2B4DYI2 1134 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 MYO1CO00159 1063 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 EBAG9O00559 213 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 FSCN2O14926 492 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 GRIN3BO60391 1043 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 PRMT3O60678 531 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 CCNE2O96020 404 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 FGGP02679 453 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 KCNA2P16389 499 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 NR1D1P20393 614 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 MDH1P40925 334 aaKnown RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 MATR3P43243 847 aaKnown RBP eCLIP9.1□□□□□ -0.95
CHD2-209ENST00000627185 NPTX2P47972 431 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 BACE1P56817 501 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 FOXK2Q01167 660 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 SPP2Q13103 211 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 BYSLQ13895 437 aaKnown RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 UAP1Q16222 522 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 XKR3Q5GH77 459 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 TNFAIP8L3Q5GJ75 292 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 DCAF12L1Q5VU92 463 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 GJB7Q6PEY0 223 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 RNF207Q6ZRF8 634 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 RELL1Q8IUW5 271 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 GSPT2Q8IYD1 628 aaKnown RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 SCYL3Q8IZE3 742 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 IL31RAQ8NI17 732 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 C1orf216Q8TAB5 229 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 ATP8B4Q8TF62 1192 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 RIN2Q8WYP3 895 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 ARL8AQ96BM9 186 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 TLCD1Q96CP7 247 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 RMDN3Q96TC7 470 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 PSMB7Q99436 277 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 CBWD1Q9BRT8 395 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 ROPN1BQ9BZX4 212 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 EPN3Q9H201 632 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 PABPC3Q9H361 631 aaKnown RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 BCAS3Q9H6U6 928 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 ROPN1Q9HAT0 212 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 UBE2TQ9NPD8 197 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 HOMER3Q9NSC5 361 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 SMARCAL1Q9NZC9 954 aa9.1□□□□□ -0.95
CHD2-209ENST00000627185 CXXC1Q9P0U4 656 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 FEZ2Q9UHY8 353 aaPredicted RBP9.1□□□□□ -0.95
CHD2-209ENST00000627185 IGKV6D-21A0A0A0MT36 114 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 GFRA3O60609 400 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 TCEA3O75764 348 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 LDHAP00338 332 aaKnown RBP9.09□□□□□ -0.95
CHD2-209ENST00000627185 PSAPP07602 524 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 TRIM49P0CI25 452 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 TRIM49CP0CI26 452 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 UNGP13051 313 aaPredicted RBP9.09□□□□□ -0.95
CHD2-209ENST00000627185 CYP11B1P15538 503 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 SMCPP49901 116 aaPredicted RBP9.09□□□□□ -0.95
CHD2-209ENST00000627185 DR1Q01658 176 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 FMO1Q01740 532 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 CAV1Q03135 178 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 CYP24A1Q07973 514 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ZNF844Q08AG5 666 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 SLMAPQ14BN4 828 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 PSMD6Q15008 389 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 SLFN12LQ6IEE8 588 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ACAD10Q6JQN1 1059 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ABHD15Q6UXT9 468 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 MICALCLQ6ZW33 695 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ANO5Q75V66 913 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 HOOK3Q86VS8 718 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 EXOC8Q8IYI6 725 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 GPD1LQ8N335 351 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 CHST13Q8NET6 341 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 PLEKHO2Q8TD55 490 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 PPM1EQ8WY54 764 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 IFT81Q8WYA0 676 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ALG3Q92685 438 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 ARHGEF26Q96DR7 871 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 KREMEN1Q96MU8 473 aa9.09□□□□□ -0.95
CHD2-209ENST00000627185 NT5C1BQ96P26 610 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms