RNA–Protein interactions for RNA: ENST00000625876.1

SNORD3A-203, Transcript of small nucleolar RNA, C/D box 3A, humanhuman

Gene SNORD3A, Length 217 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3A-203ENST00000625876 KRT31Q15323 416 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 TPD52L1Q16890 204 aaPredicted RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 DUOXA2Q1HG44 320 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 GLRA4Q5JXX5 417 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 FAM109BQ6ICB4 259 aaPredicted RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 CD300LGQ6UXG3 332 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 SV2AQ7L0J3 742 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 TRAPPC11Q7Z392 1133 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 TMCO2Q7Z6W1 182 aaPredicted RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 RNF168Q8IYW5 571 aaPredicted RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 LRRC52Q8N7C0 313 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 RNF169Q8NCN4 708 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 BEST2Q8NFU1 509 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 CACTINQ8WUQ7 758 aaKnown RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 KIF12Q96FN5 646 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 DDX27Q96GQ7 796 aaKnown RBP12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 FAXDC2Q96IV6 333 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 FNBP1Q96RU3 617 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 MTMR12Q9C0I1 747 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 SIX4Q9UIU6 781 aa12.07□□□□□ -0.48
SNORD3A-203ENST00000625876 CHD7Q9P2D1 2997 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 TRANK1O15050 2925 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 BECN2A8MW95 431 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 C5orf67F2Z3F1 127 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 N4BP1O75113 896 aaKnown RBP12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 UPP2O95045 317 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 VNN1O95497 513 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 POMCP01189 267 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 TMEM191BP0C7N4 346 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 ATP1A3P13637 1013 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 LAG3P18627 525 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 FMO5P49326 533 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 MXI1P50539 228 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 RAB30Q15771 203 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 UPP1Q16831 310 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 CBWD6Q4V339 395 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 EPC2Q52LR7 807 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 CBWD3Q5JTY5 395 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 CBWD5Q5RIA9 395 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 TDRD10Q5VZ19 366 aaKnown RBP12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 KRT39Q6A163 491 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 SARM1Q6SZW1 724 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 CHRDL2Q6WN34 429 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 LIMS2Q7Z4I7 341 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 ZNF280BQ86YH2 543 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 C18orf25Q96B23 403 aaPredicted RBP12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 CCDC127Q96BQ5 260 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 ANKRD36BP1Q96IX9 119 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 YME1L1Q96TA2 773 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 TUBGCP2Q9BSJ2 902 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 XYLT2Q9H1B5 865 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 MARCH5Q9NX47 278 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 MAGEC2Q9UBF1 373 aaPredicted RBP12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 INPP5FQ9Y2H2 1132 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 RWDD3Q9Y3V2 267 aa12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.06□□□□□ -0.48not detected■■■■■ 70.7
SNORD3A-203ENST00000625876 MRPL42Q9Y6G3 142 aaKnown RBP12.06□□□□□ -0.48
SNORD3A-203ENST00000625876 A0A1B0GTH6 734 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 LINC01553A4QN01 128 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 LGALS16A8MUM7 142 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 TLL1O43897 1013 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 TNNC2P02585 160 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 AFPP02771 609 aaKnown RBP12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 GALTP07902 379 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 DLATP10515 647 aaKnown RBP12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 TNNI1P19237 187 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 ATICP31939 592 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 PNPLA4P41247 253 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 KCNH2Q12809 1159 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 BTG3Q14201 252 aaPredicted RBP12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 C9orf57Q5W0N0 161 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 SLC39A11Q8N1S5 342 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 LMO3Q8TAP4 145 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 SAMD11Q96NU1 681 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 POP1Q99575 1024 aaKnown RBP12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 PBX4Q9BYU1 374 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 RBSNQ9H1K0 784 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 NDST4Q9H3R1 872 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 FAM124BQ9H5Z6 455 aaPredicted RBP12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 DPP3Q9NY33 737 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 HCSTQ9UBK5 93 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 DNAJB4Q9UDY4 337 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 PTPRDP23468 1912 aa12.05□□□□□ -0.48
SNORD3A-203ENST00000625876 TMEM265A0A087WTH1 108 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 LCHNA4D1U4 455 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 GOLGA6L19H0YKK7 550 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 PODXLO00592 558 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 ZC3H11AO75152 810 aaKnown RBP eCLIP12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 ARHGEF15O94989 841 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 ASS1P00966 412 aaKnown RBP12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 PPM1AP35813 382 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 MTIF2P46199 727 aaKnown RBP12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 GCLMP48507 274 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 SLC11A1P49279 550 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 COPB1P53618 953 aaKnown RBP12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 TPM4P67936 248 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 TFAMQ00059 246 aaKnown RBP12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 VWA3BQ502W6 1294 aa12.04□□□□□ -0.48
SNORD3A-203ENST00000625876 DCAF17Q5H9S7 520 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms